Gene Spea_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1225 
Symbol 
ID5661624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1489454 
End bp1491382 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content48% 
IMG OID641235787 
Productpotassium efflux system protein 
Protein accessionYP_001501087 
Protein GI157961053 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.403013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCTT ATTTTATTCA AGCTTTTATC TATTTATGCG CCGCCGTCAT CGCCGTGCCT 
ATTGCTAAGC GGCTCGGCCT AGGCTCAGTG CTGGGCTATT TAATGGCAGG GGTAGTAATA
GGGCCTATTA TTGGTCTGGT CGGTGCCGAA ACCAACACAC TGCAGCACTT TGCCGAATTT
GGCGTGGTGA TGATGCTATT CCTAGTAGGT CTCGAACTTG AGCCCAAGAT GCTCTGGAAT
ATGCGCAATA AACTTATTGG TTTAGGTGGA CTTCAAGTAG GACTCTCTAC CTTAGTGGTG
ATGGGTATCG CCCTGAGTTT CGGCTATGGC TGGAGTATCG CCCTCACGGT GGGAATGATT
TTCTCGCTGT CATCGACCGC TATCGTACTG CAGACCTTCA ATGAGAAGAG TCTAACCAAA
ACCGAAGGCG GAAAGAATGC CTTTTCGGTG CTGTTATTTC AAGATATCGC CGTGATCCCT
ATGCTGGCGT TTATCCCGCT CTTGGCCTTG CCTGAACTCG TCGAAAAAGC TCAGTCTGTC
ACCCAAAGTG CTGCAGAGCA CCATGAGGAG CTTTCGCTCG TCGCAGGTCT GCCGGGCTGG
GCTTACGGAG TGGTCGTCTT GATGGCCATC GCTAGCGTCG TGATTGGCGG TCATTATTTG
AGTCGTCCGC TATTTCGCTA TGTCGCCAGC TCAGGACTTA GGGAGATCTT TACTGCCACC
GCGCTTATGC TGGTTATTGG TATTGCTGCA CTCATGAGCC TCGTAGGGCT ATCTCCCGCA
CTAGGCACCT TCCTTGCGGG CGTTGTATTG GCAAACAGTG AGTTTAGACA CGAGCTTGAG
TCCAATATCG AGCCTTTCAA GGGGCTATTA CTCGGGTTAT TTTTTATTAC CGTGGGCGCA
GGCATCAACT TCGATGTGCT GCTCAGTAAT ATCGGCCCAG TGATGGCAAT GACCCTTGGG
GTCATTCTGA TTAAGGCCGC TGTATTACTG GTACTGGCCT TTATTTTTAA GATCAGGGGC
AGTGACCGTT GGCTATTTGC CTTGAGCCTA GCGCAAGCGG GTGAGTTTGG TTTCGTGCTA
CTGAGTTACA CAGTGCAAAA CCATGTGATC CCTACCGAGC TTGCTCAGTT ACTGTCACTA
GTGGTTGCCA TATCCATGTT CCTCACACCA GGCCTATTCA TTCTGTTTGA TAAAGTCATT
TTACCCCGCT ATGAAAAAAC AGAAAATACA CGAGAGCCTG ATGATATCGA CGAGACAGGC
ACTGTGATTA TTGCCGGAGT CGGCCGCTTT GGGCAGATAG TTAATCGCCT GCTGGTGACC
AATGGTGTTA AAACAGTCGT ACTGGATCAT GAAGTTCAGC AAATCGAAAA CTTAAGGAAA
ATCAATACAA AAAGCTATTA CGGCGATGCC ACTCAGCCCG ACTTACTCCA TACTGCAGGT
ATCGAGCAGG CTAAGATGCT TGTCATTGCC ATAGATGATC CTGAACGAGC CGTAGGTTTA
GTCGAATATA TCAAGCATAC CCATCCCCAT GTGATCGTGA TGGCTCGCGC CTTTGATCGA
AGGCACCTGT ATCGTCTTCG TAATGCGGGG GCTGACTTTA TGGTAAGCGA GACCTTCCAT
TCGGCGCTCA ATTTAGGTAA GCATGCACTG ATAAAACTTG GCGTACACCC GTTTAAGGCC
GAGCAACAGC GTGCAACTTT CTATGAGACC GAAACGACTC ATAAAGACAC TCTGTATGAG
GCTTGGAAAC AGTTCACCGA AGACGATAAA TACCTAGTAC ATTATCGCGA TATGTTTATC
CAGCTTGAAG AAACTCTAAG CGAAGCGATG AAAGACGAGC GTTATCGCAG CTTTTCAAAA
GTGGAGCGCA GCTGGACGCC ACCTCCTAAG GAAAATCATA CTGAATTTTC TAAAGCTGAA
AGCGATTAA
 
Protein sequence
MTAYFIQAFI YLCAAVIAVP IAKRLGLGSV LGYLMAGVVI GPIIGLVGAE TNTLQHFAEF 
GVVMMLFLVG LELEPKMLWN MRNKLIGLGG LQVGLSTLVV MGIALSFGYG WSIALTVGMI
FSLSSTAIVL QTFNEKSLTK TEGGKNAFSV LLFQDIAVIP MLAFIPLLAL PELVEKAQSV
TQSAAEHHEE LSLVAGLPGW AYGVVVLMAI ASVVIGGHYL SRPLFRYVAS SGLREIFTAT
ALMLVIGIAA LMSLVGLSPA LGTFLAGVVL ANSEFRHELE SNIEPFKGLL LGLFFITVGA
GINFDVLLSN IGPVMAMTLG VILIKAAVLL VLAFIFKIRG SDRWLFALSL AQAGEFGFVL
LSYTVQNHVI PTELAQLLSL VVAISMFLTP GLFILFDKVI LPRYEKTENT REPDDIDETG
TVIIAGVGRF GQIVNRLLVT NGVKTVVLDH EVQQIENLRK INTKSYYGDA TQPDLLHTAG
IEQAKMLVIA IDDPERAVGL VEYIKHTHPH VIVMARAFDR RHLYRLRNAG ADFMVSETFH
SALNLGKHAL IKLGVHPFKA EQQRATFYET ETTHKDTLYE AWKQFTEDDK YLVHYRDMFI
QLEETLSEAM KDERYRSFSK VERSWTPPPK ENHTEFSKAE SD