Gene Spea_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1222 
Symbol 
ID5661621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1486448 
End bp1488091 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content47% 
IMG OID641235784 
ProductPepSY-associated TM helix domain-containing protein 
Protein accessionYP_001501084 
Protein GI157961050 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGA CTTTTTTTCG CAGCATGACT TGGTTGCACA CTTGGGTTGG CTTACTCGTA 
TGTTGGATAT TATTGCTGGT ATTTTTTGCT GGCACACTCA GTTACTACCG TTATGAGATG
ACGTTGTGGA GCAAGCCAGA GCTGCATAAA AACGTGTTCC AGCAGTATGA CGCTACGAAG
GTAACCAATG AACTTGAGCG TGCTCAGCGC TATTTAGAAG AACATGCTCC CGATGCGCGA
GACTGGCGAG TTAACTTCCC TACCGACCGT AAGCCCTATA TGAGCTACAG CTGGCAAACA
CAGCCTGAAG AGGGTCAGCG TCGGGGTAAG TTTATTGAGC ATATTGCCAG AACTGATTCC
GAAGAGTTGG TCACGGAGGT ACGCGAATCG AAAGGTGGAC ATTTTTTCTA TCGTTTGCAC
TTTGACCTGC ACTACATTCC CGCTAAAGTC GCTCGTTGGA TAGTCGGCTT TTGTACCATG
TTTATGCTCT TAGCACTGAT TAGCGGCATA GTGATCCATA AGCGTATTTT TAAGGATTTT
TTCAGCTTTA GACGTAACAA AGGCAGTCGC TCATGGTTAG ACGCCCATAA TGTCAGCTCA
GTGATTGCCC TGCCTTATCA CCTGATGATC ACTTACACAG GTCTTGTAAC GCTGATGGTG
ATGTATATGC CATGGGGTGT TATTACGGCC TATGATGGCG ACTTTAAAGC CTTTAGTAAG
GAGTTAAGGC CAAGCAGAGT ACAGGTTAGC CCTATAGGCA TTGAGGCACA AACGGTATCC
TTGAGTACGC TATTACCCGA GGTCAGAGAT ATCTGGGGTC AAGCCCCGCT CAAACAGGTC
GTTGTTAATA ACCCAAGCGA TCAAAATAGC CGGGTTAATT TCTATAAAGA GACCGGAGAA
GCGGTTACTG ACAGAAGAAC GGCGATTACC TTTAACGGTA CCAATGCTGA GTTGCTCAGC
CCAGGCATAG AGCCTGAGTC GGGCGCGCAT AATACTCATG ATACCTTAAT TGCCTTGCAT
ACCGGACGCT TCGCAGAGCC TGTGCTGCGC GCACTATTCT TCATTAGTGG CATCTTAGGC
TGCGCCATGA TTACAACGGG AACATTACTC TGGGCAGTGA AAGTTCGCCA GAAACAACAA
AAGCAGATTA AACAAGGTGT GAAAGCCAGT TTGGGCTTAC GCCTAGTAGA AGGACTAAAC
CTGACTTTCA TCACAGGTTT GCCTTTAGCC ACTGCGGCCT TCTTCTACGC CAACCGTCTG
TTACCTGTCG ATCTGGTTAA TCGCGCGCAG TGGGAAGTTA ATAGCTTCTT TATCGCACTT
GCTTGTGTCG CGTTATTAGC CTGTATCAAC CGTACGCTCA CCGCCTGGCG CCTTGTTATG
ACAGTGACGG CAATAGCCTT AATCGCCATT CCAGTCTTAA ACGCATTGAC CTCAAATAGT
GATTTATTAA CTAACATTGC GCAGAAACAG TGGGCTTTAG TGGGCTTTGA TTTAATGTGC
GTATTTTTCG GGCTCTCGCT TATTTTTGCG CGAACGAAAC TTGGTAGCAA ACAAGGTGTC
ATACCAAAAA GAACCGTGAA TACACGCAGT GAAAACAATC GGATGAGAGT CAACACCTCA
TCTGCGACGA AAGAAGGAGT ATAG
 
Protein sequence
MKETFFRSMT WLHTWVGLLV CWILLLVFFA GTLSYYRYEM TLWSKPELHK NVFQQYDATK 
VTNELERAQR YLEEHAPDAR DWRVNFPTDR KPYMSYSWQT QPEEGQRRGK FIEHIARTDS
EELVTEVRES KGGHFFYRLH FDLHYIPAKV ARWIVGFCTM FMLLALISGI VIHKRIFKDF
FSFRRNKGSR SWLDAHNVSS VIALPYHLMI TYTGLVTLMV MYMPWGVITA YDGDFKAFSK
ELRPSRVQVS PIGIEAQTVS LSTLLPEVRD IWGQAPLKQV VVNNPSDQNS RVNFYKETGE
AVTDRRTAIT FNGTNAELLS PGIEPESGAH NTHDTLIALH TGRFAEPVLR ALFFISGILG
CAMITTGTLL WAVKVRQKQQ KQIKQGVKAS LGLRLVEGLN LTFITGLPLA TAAFFYANRL
LPVDLVNRAQ WEVNSFFIAL ACVALLACIN RTLTAWRLVM TVTAIALIAI PVLNALTSNS
DLLTNIAQKQ WALVGFDLMC VFFGLSLIFA RTKLGSKQGV IPKRTVNTRS ENNRMRVNTS
SATKEGV