Gene Spea_1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1211 
Symbol 
ID5661610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1475309 
End bp1475812 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content47% 
IMG OID641235773 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001501073 
Protein GI157961039 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.607213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAC CATTTGTTGC AGTATTAATG GGATCTGATT CAGATCTGCC TACAATGCAA 
GCCACCCTCG ATGTGCTTCG AACTTTCGAA ATCAACTTTG AAGCAAAAGT CACTTCAGCG 
CACCGTACGC CTGCTGCTAC GCATGCCTAC GTAACTGATG CTGAAGCGCG TGGTTGTAAA 
GTCTTTATTT GTGCTGCAGG TCTTGCTGCA CACTTAGCTG GTGCTGTAGC GGGTATTACT 
ACTCGTCCAG TAATCGGTGT TCCAATTGAT TGTGGTCCAC TACAAGGCCA CGATGCACTT 
TTATCAACCG TAATGATGCC TGGCGGCGTT CCAGTAGCAA CTGTTGCTAT CGGTAGTGCT 
GGCGCTAAAA ATGCGGGTTA CCTTGCTGCG CAAATGTTAG CTGTAGGTGA TGATGCACTT 
GCTGTAGCCG TTAAAGAAGA GCGTGCTAAG TCTGCTGAAG CTGTTCAAGC TAAAGACGCA 
GCTCTACAAG CTAAACTAGC TTAA
 
Protein sequence
MSKPFVAVLM GSDSDLPTMQ ATLDVLRTFE INFEAKVTSA HRTPAATHAY VTDAEARGCK 
VFICAAGLAA HLAGAVAGIT TRPVIGVPID CGPLQGHDAL LSTVMMPGGV PVATVAIGSA 
GAKNAGYLAA QMLAVGDDAL AVAVKEERAK SAEAVQAKDA ALQAKLA