Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1202 |
Symbol | |
ID | 5661601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1463402 |
End bp | 1464508 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235764 |
Product | agmatine deiminase |
Protein accession | YP_001501064 |
Protein GI | 157961030 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
TIGRFAM ID | [TIGR03380] agmatine deiminase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACGAA CATTAAACTC CACTCCTAGA GAAGACGGCT TTCGAATGCC TGGGGAATTT GAACCTAAAA AAGGTTGTTG GTTAGGCTGG CCCGAGCGCA GCGATGTTTG GCGCAATGGG GCTAAACCTG CGCAGAAAGT TTGGGTTGAG ATCTGTACTG CCATCGCATC GAGTGAGCTG GTGACGGTAT GTGTGTCTCA GGCTCAGTAT GAGAATGCAC GCAACATGTT GCCTGAAACG GTTCGAGTCG TGGAGATGAG TACCAATGAT GCTTGGTTTA GGGATTCAGC TTGCGCCTTT CTCGTTAATG ATACGGGGGA GGTCAGAGGT ACTGATTGGG AGTTTAACGC TTACGGTGGC TTAAATGGTG GGCTTTATTT TCCATGGGAT AAAGATGAGA AAATCGCGCA GAAAATTCTT GAAATAGAAA ACCTTGATCG TTACCGCTCA ACGCTTATTG CTGAGATGGG GGGGATCCAA TGTGATGGTC AAGGAACCTT ATTGACCACA GAGCAATGCC TACTCAACGT AAACCGAAAT GCACATCTTG GTAAGGCAGA GGTTGAGCAG CAGCTTCGAG ACTATATGGG AGTTGAAAAG ATTATTTGGT TACCTCGTGG TTGTAAGTTT GATGAGACAG ATGGTCATAT TGATGATCTT GCTTGTTGGG TCGCTCCTGG AGAACTCTTG TTGCAGTGGA CTGATGATAG CAGCGATCCA CAATACGAAA TCTATCAAGA AGCCTATGAG ATCTTAAGTC GAAGCACTGA TGCTCGGGGC CGAAAAATTA TCATACATAA AATCCCCCAA CCTAAGGCAC TGGAGTGGAC AGAGGAAGAG GCTTCTGGGC TGGATGTTGC ACTGGGAACT CATAGCCGGG TAGCAGGTAC TAAAATTTGC GCCTCTTATA TCAATTACTA CATAGGTAAC TCAGTCATCA TGGTCCCCGC TTATGACGAC CCTATGGATG AGACCGCCCA AGCCATACTA CGCAAGCTTT TTCCTAATCA TAAAGTTATC GGCATTCAAA ATGCCCGTGA AATTCTGCTG GGGGGAGGCA ATGTCGCCTG TATTACTCAG CCACAGTACG CAGGTATTAC CGCATAG
|
Protein sequence | MSRTLNSTPR EDGFRMPGEF EPKKGCWLGW PERSDVWRNG AKPAQKVWVE ICTAIASSEL VTVCVSQAQY ENARNMLPET VRVVEMSTND AWFRDSACAF LVNDTGEVRG TDWEFNAYGG LNGGLYFPWD KDEKIAQKIL EIENLDRYRS TLIAEMGGIQ CDGQGTLLTT EQCLLNVNRN AHLGKAEVEQ QLRDYMGVEK IIWLPRGCKF DETDGHIDDL ACWVAPGELL LQWTDDSSDP QYEIYQEAYE ILSRSTDARG RKIIIHKIPQ PKALEWTEEE ASGLDVALGT HSRVAGTKIC ASYINYYIGN SVIMVPAYDD PMDETAQAIL RKLFPNHKVI GIQNAREILL GGGNVACITQ PQYAGITA
|
| |