| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1201 |
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| Symbol | |
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| ID | 5661600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1462229 |
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| End bp | 1463170 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235763 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501063 |
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| Protein GI | 157961029 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCGCC TTCCGCCATT AAACCCTTTG AGAGCCTTCG AGTCTGCCGC TAGACATGAG
CATTTCTCTC GTGCTGCAGA TGAACTCTGC GTCACCCATA GCGCGATTAG TCATCAAGTG
AAGACTTTAG AAGATGCCTT AGGGATTAGG TTGTTTGAGA AGCAAGGCCG TAACGCAAAA
TTGACTCAGT CTGGAGCAAA TCTATTACCA GCAATTCAAG AAGCATTCGA TATCATAGGT
CAAGCCTGTG AAAAGGCGAT TGAGCCAGGA CTCAGTGGTC GCTTGGTCAT TTCCGCTCCC
CCCGAACTCT CCTCTAAGTG GCTTATTAAA CAGATTGGCG ATTTTGCCAT TCGTTATCCT
TCAATCGACG TCAGTCTATT CGTGCACTCT AGTGACGAGA CTAACATTAA CCCACAGGCC
GATCTTTCGA TTATCTATGG TGCAGGAGAT GCCGATTGGA ATCGCTATTG GGTCACTCCG
ATTAAAAGAA TGGAGTTTTT CCCTGTCTGC AGCCCCAAGC TGCTCGAATC GGAAAATAAT
CTGGGGGGCG CGGCTAAGAA AGAGGATTGT CGCTCTCTAG ACTTGAGTGT GCAGCGCCTA
TTACACGACG ATCAAGATGG TAAAACTTGG GCTACTTGGC TTGGAGCTCA TGCGCCGCAT
ATCTTAAATA CACCGCAAAA CTTAAACTTT GCCCATGCTG GTCTGTCTCT AGAAGCGGCA
ATCGCTGGAT ATGGGGTTGC TATCGGTGAT AATTTTACCG CCAGTACTGA GCTAGAGAGT
GGTAAGTTGG TTAGGCCTTT TGAGCACAGT GTTCCTTCAT TGGGTAACTA TTATTTGGTT
GCAGAGAAAC GAAAAAAAGG CGATGTAAAA CTCATGACTT TTATTGATTG GCTGCTGGCT
CAAATCAATA CTAAATTCAG CACCGTTAGC CTCCAGGATT AG
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| Protein sequence | MRRLPPLNPL RAFESAARHE HFSRAADELC VTHSAISHQV KTLEDALGIR LFEKQGRNAK
LTQSGANLLP AIQEAFDIIG QACEKAIEPG LSGRLVISAP PELSSKWLIK QIGDFAIRYP
SIDVSLFVHS SDETNINPQA DLSIIYGAGD ADWNRYWVTP IKRMEFFPVC SPKLLESENN
LGGAAKKEDC RSLDLSVQRL LHDDQDGKTW ATWLGAHAPH ILNTPQNLNF AHAGLSLEAA
IAGYGVAIGD NFTASTELES GKLVRPFEHS VPSLGNYYLV AEKRKKGDVK LMTFIDWLLA
QINTKFSTVS LQD
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