| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1200 |
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| Symbol | |
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| ID | 5661599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1460958 |
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| End bp | 1462088 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235762 |
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| Product | sodium ion-translocating decarboxylase, beta subunit |
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| Protein accession | YP_001501062 |
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| Protein GI | 157961028 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGAT TAATCGCGTT TTGGTCTGAA TCTGGCATTG CTAACTTTAC CTCGGGCCAA
TTGCTAATGA TGGGCGTGGG TTGCCTGTTG TTATATTTAG CAATCGCAAA GAAGTTTGAA
CCATTATTGC TGTTACCCAT AGGCTTTGGT GCCATATTAG CAAACATTCC CAATGGTGGA
TTTACCGAGG AAGGCGGCCT GCTGTATTTT GCCTACCACG TGGGTATTGA AACAGGAGTG
TTTCCGCTGC TTATCTTTAT GGGAGTGGGC GCGTTAACAG ACTTTGGCGC GCTTATCGCT
AATCCTAAGA TGTTGCTACT TGGCGCAGCG GCCCAGTTTG GTATTTTTGC CACCTTAATC
GGCGCGATTG CACTTAACTG GGTACCGGGT TTTGAGTTCT CCATGACAGA TGCGGCGGCG
ATTGCCATCA TTGGTGGCGC GGATGGACCA ACGGCTATCT TCTTAGCATC TAAACTGGCA
CCGGATCTAC TCGGGGCAAT TGCGGTTGCA GCCTATTCAT ATATGGCTTT GGTACCACTG
ATCCAGCCGC CAATCATGCG TCTGCTGACG ACCGAGTCTG AGCGTAAAAT CAAGATGGAG
CAGCTGCGAG AGGTAAGCAA GAAGGAGAAG ATTATCTTCC CTCTGATGGT GCTTGGCTTA
ACTATCTTGT TCCTGCCAGC TGCGACGCCA CTGGTTGGTA TGTTCTGCCT AGGTAACTTG
ATGCGCGAAT CGGGCGTAGT CGATAGATTA TCGAGTACCG CGCAGAATGA GTTGATCAAT
ATAGTGACCA TTTTCTTAGG CCTTGCTGTG GGCTCTAAAT TATCTGCCGA GCAGTTTCTG
CAGATGGAGA CCTTAGGGAT CTTAGTACTG GGCGCTGTTG CTTTCTCGAT TGGTACTGCG
GCGGGTGTGT TAATGGCCAA ACTGATGAGT AAGCTCTCTG GCGGTAAGAT TAACCCTCTG
CTAGGGGCGG CAGGTGTCTC TGCAGTTCCT ATGGCGGCGC GAGTAGTGAA CAAGGTCGGT
CTCGAGGCTA ATAATCAGAA CTTCCTGTTG ATGCATGCAA TGGGGCCAAA CGTGGCCGGA
GTACTAGGTA GTGCTGTTGC TGCTGGTGTG TTGTTAGCTG TACTTGGTTA G
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| Protein sequence | MEGLIAFWSE SGIANFTSGQ LLMMGVGCLL LYLAIAKKFE PLLLLPIGFG AILANIPNGG
FTEEGGLLYF AYHVGIETGV FPLLIFMGVG ALTDFGALIA NPKMLLLGAA AQFGIFATLI
GAIALNWVPG FEFSMTDAAA IAIIGGADGP TAIFLASKLA PDLLGAIAVA AYSYMALVPL
IQPPIMRLLT TESERKIKME QLREVSKKEK IIFPLMVLGL TILFLPAATP LVGMFCLGNL
MRESGVVDRL SSTAQNELIN IVTIFLGLAV GSKLSAEQFL QMETLGILVL GAVAFSIGTA
AGVLMAKLMS KLSGGKINPL LGAAGVSAVP MAARVVNKVG LEANNQNFLL MHAMGPNVAG
VLGSAVAAGV LLAVLG
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