Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1195 |
Symbol | recA |
ID | 5661594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1451017 |
End bp | 1452084 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235747 |
Product | recombinase A |
Protein accession | YP_001501057 |
Protein GI | 157961023 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.111178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAG ATCCAAATAA AGAGAAAGCA TTGAACGCTG TACTTGGACA GATTGAGAAG CAGTTTGGTA AAGGCTCAAT CATGAAGTTA GGTGAAGACC GTTCAATGGA CGTAGAGACC ATTTCTACTG GCTCATTAGC TTTGGACGTA GCTTTAGGCG CTGGCGGCTT ACCTATGGGA CGTATCGTTG AGATCTATGG TCCAGAATCT TCAGGTAAAA CTACCTTAAC ATTAGAAGTT ATCGCTGCCG CTCAAAAGCA GGGTAAGACC TGTGCCTTTA TCGATGCTGA GCATGCTCTT GACCCTATCT ACGCTAAAAA GCTAGGTGTT GATATCGATA ACTTATTATG TTCACAGCCA GATACTGGTG AGCAGGCGCT TGAAATCTGT GATGCACTAA CTCGAAGCGG CGCCGTTGAC GTTATCGTCG TCGACTCGGT TGCAGCATTG ACACCAAAAG CGGAAATCGA AGGTGAAATC GGTGACTCTC ACATGGGCCT TGCGGCGCGT ATGATGAGCC AAGCAATGCG TAAGCTTGCT GGTAACCTAA AGCAGTCAAA TACACTTCTT ATCTTCATTA ACCAAATCCG TATGAAGATT GGTGTAATGT TCGGTAACCC AGAAACAACT ACGGGTGGTA ACGCACTTAA GTTCTATGCT TCTGTTCGTC TAGATATCCG CCGTACAGGT GCGATTAAAG ATCGAGAAGA GGTTATTGGT AACGAAACCC GCGTAAAAGT GGTTAAGAAC AAGATTGCCG CACCATTTAA ACAAGCTGAA TTCCAAATCC TTTACGGTCA AGGCATCAAC AGCACGGGTG AGTTGGTTGA CCTTGGTGTA CAGCACAAGT TAATTGAAAA GGCAGGTGCT TGGTACAGCT ACAAAGGTGA CAAGATCGGT CAAGGCCGTG CAAATGCCGG TAAGTATCTA ATCGAAAACC CAGCAATTTC AGATGAAATT GAAACAACAC TGCGCGCTAT GCTTCTTGGC AACGGTGAGA AGGTGAGTGC AGATTCAGCT GACACCGCTG GCGATAACAT CGATTTAGAG ACTGGCGAAG TATTTTAA
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Protein sequence | MKIDPNKEKA LNAVLGQIEK QFGKGSIMKL GEDRSMDVET ISTGSLALDV ALGAGGLPMG RIVEIYGPES SGKTTLTLEV IAAAQKQGKT CAFIDAEHAL DPIYAKKLGV DIDNLLCSQP DTGEQALEIC DALTRSGAVD VIVVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA GNLKQSNTLL IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRTG AIKDREEVIG NETRVKVVKN KIAAPFKQAE FQILYGQGIN STGELVDLGV QHKLIEKAGA WYSYKGDKIG QGRANAGKYL IENPAISDEI ETTLRAMLLG NGEKVSADSA DTAGDNIDLE TGEVF
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