| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1192 |
|---|
| Symbol | |
|---|
| ID | 5661591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1446069 |
|---|
| End bp | 1446959 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641235744 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001501054 |
|---|
| Protein GI | 157961020 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTCG TTTACTATTA TTGTGTCTAC GTGGTGCTGC TTTCTGGCTG TAGTTTTCAG
GCAGATAGAC CTGCACCTGT AGAATCTATT AACGGTCCCC AAACTCCGTC GATCACCAAA
GGATCGATTA CAGGAAGTCG TTATATCGTA AAAAATGGTG ATACTCTCTA CTCTATCGCC
TGGGGAGCAA ATAAAGATTT TGTTGATATT GCAAAGCAAA ATCGTCTGCC AAAGCCTTAT
ACCATCTACC CTGGACAAGT ATTGAGTCTT AGCTCTAAAA GATATGTTAC AAATAGCCAA
AGCGCCAAAA AAACGACGAA TTCAAGCATT AAAACCACTG CCGTTAATAG TAATAATACA
CAAAAACAAG TGGTTAGTGC TAAACCATCT ACCGTCTCCA GCCAGAATCA AGGGTCAAAA
AAACAACTTG ATCCTGTCGC CAAGCCTGCG TACTCTGTAA CAAGTAGTCA ACAAGATGCT
AACCGAATTA TCCACAAGCC TGTCGAGCTT CCAAAGAAAG TAAGCCGCTG GTCATGGCCT
GTGAAAGGTA AGGTGATTGG AACTTTCTCC GCCAAAGAGC AGGGAAATAA AGGGATAAAG
ATCGCAGGTA ACCGAGGTGA TGTGATTCGA GCTGCTGCAA GTGGTCGAGT CGTTTACGCT
GGTAGTGCAC TTCGGGGGTA CGGTAACTTA GTTATCATTA AGCATAGTGA TGATTATCTA
AGTGCTTATG CTCATGCTGA TAAGATCTCA GTTAAGGAAA AGCAACTTGT TAGTGTTGGA
CAGACAGTTG CGACAATGGG TAGTACTGGT ACAAATCGGG TCATGTTACA TTTTGAGATC
CGATATCATG GAAAGTCAGT TAATCCTGTT AAATTTTTGC CTAAACAATA G
|
|---|
| Protein sequence | MRFVYYYCVY VVLLSGCSFQ ADRPAPVESI NGPQTPSITK GSITGSRYIV KNGDTLYSIA
WGANKDFVDI AKQNRLPKPY TIYPGQVLSL SSKRYVTNSQ SAKKTTNSSI KTTAVNSNNT
QKQVVSAKPS TVSSQNQGSK KQLDPVAKPA YSVTSSQQDA NRIIHKPVEL PKKVSRWSWP
VKGKVIGTFS AKEQGNKGIK IAGNRGDVIR AAASGRVVYA GSALRGYGNL VIIKHSDDYL
SAYAHADKIS VKEKQLVSVG QTVATMGSTG TNRVMLHFEI RYHGKSVNPV KFLPKQ
|
|---|
| |