Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1190 |
Symbol | surE |
ID | 5661589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1444116 |
End bp | 1444868 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235742 |
Product | stationary phase survival protein SurE |
Protein accession | YP_001501052 |
Protein GI | 157961018 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGA TCCTTATCAG TAATGATGAT GGAGTGAATG CGATAGGCAT TGTTGCTCTG ACTCGGTCTT TGAGCCAAAT AGCAGAAACA CTCACTGTCG GGCCTGATAG AAACTGCTCT GGTGCGAGTA ACTCGTTAAC CTTGACCAAC CCGCTTCGAC TCAATACCTT AGACAATGGT TTTATCTCGG TAAGTGGTAC ACCGACCGAC TGCGTTCATT TAGCCATACG AGAATTATAT CAAGATGAGC CTGATATGGT GGTATCAGGT ATTAATGCTG GGGCGAATAT GGGCGATGAT ACCTTGTATT CAGGCACCGT AGCGGCGGCG ATGGAAGGAC GCTTTCTTGG TTTTCCTGCG ATAGCTATTT CTTTGGTTGG CCATGAGCAT TACGAAACTG CGGCTCATTA TGCGTTAAAA ATCGTTAAAG CCTTGCAGGA TAACCCTGTT GCTCAGGATA AGATCTTGAA CATCAATGTA CCTGACTTGC CATTGTCTGA AGTGAAAGGG ATGAAAATCA CTCGTCTCGG TGCAAGGCAT AGAGCCGAAG GCATGGTGAG AACTCAAGAT CCTGCCGGAA AAGAGATTTT TTGGTTAGGA CCACCGGGTG ATGAACAAGA CGCCAGTGAT GGCACTGATT TTCACGCTGT CGCTAATGGT TATGTGTCTA TCACTCCACT AACTGTTGAT TTAACCGCTT TTGAGCAACT CAAGGCTCTG GATAATTGGT TAGCTAACAT CAGTGAAAAA TAG
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Protein sequence | MMKILISNDD GVNAIGIVAL TRSLSQIAET LTVGPDRNCS GASNSLTLTN PLRLNTLDNG FISVSGTPTD CVHLAIRELY QDEPDMVVSG INAGANMGDD TLYSGTVAAA MEGRFLGFPA IAISLVGHEH YETAAHYALK IVKALQDNPV AQDKILNINV PDLPLSEVKG MKITRLGARH RAEGMVRTQD PAGKEIFWLG PPGDEQDASD GTDFHAVANG YVSITPLTVD LTAFEQLKAL DNWLANISEK
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