Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1182 |
Symbol | |
ID | 5661581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1435005 |
End bp | 1437212 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235734 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001501044 |
Protein GI | 157961010 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000045957 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCTG TTCGTGAAGC ACATTTTAGC GACCCTGATT TTCAACTTGA AGAATGGGTG CAACGTTATA TTAGTGATGC TTCGGAAGCT CAAATTCTTT TGGCCTTAAT TGAGCGGGTC GAACTGCTCG TGGGACAAAA GAAAGACGCG AACGTTACTG TCTTAAAACG TGCGCGCGAG ATGATAGAAA TTCTTGCGCC GCTGAATATG GATATTGAAA CACTGCAGGC CGCCATCTTG TTTGTGGTGT TTGATGCTGG GCTCATTACT CAAGAAGATA TTGAAGAAGA GTTTGGCGCT AAGCTAGCCG TGTTGGTGTC GAGTGTTGAG ACCATGAACG CTATTGGCGC CCTGAAAGTT GATAATCAGA CTCGTAGCGG CGAGCCGCAG ATCGATAATA TTCGTAAGAT GTTATTGGCG ATGGTGGAAG ATGTGCGCGC GGTGGTGATT AAACTTGCCG AACGCATCTG TTTACTTCGT GAGATTAAAA ATGCCGATGA GGAGGTAAAA GTCCTTGTCG CCCGCGAGAT TGCCGATATC TATGCGCCAC TGGCTAACCG TCTTGGTATT GGTCAGCTTA AGTGGGAACT AGAGGATATC TCATTCCGTT ACCTGCACCC GCAAACTTAT AAAGATATCG CCAAGCAGCT CGATGGTAAG CGCCTCGATA GAGAAACCTT TATCGATGAC TTCGTCAGCC AGTTGCAGGC GCGACTCGAT AAAGATCTGA TCCGCGCAAA GGTCTACGGC CGCCCTAAAC ATATCTACAG TATCTGGAAG AAGATGAAGG GCAAACAGCT CAAATTTGAT GAGCTGTTTG ACGTGCGGGC CGTGCGTATC GTGACTGACC GCCTACAAGA TTGTTACGGC GCATTAGGCG TAGTGCATAC ACTTTGGCAC CATATTCCAC GTGAATTTGA TGACTACGTT GCAAACCCTA AGCCAAACGG TTACCAGTCT ATTCATACCG TGGTGGTTGG GCCTGAAGAT AAAACAGTCG AAATTCAAAT TCGCACCGAG CAGATGCATG AAGATGCTGA GCTTGGGGTT GCGGCGCACT GGAAATATAA AGAAGGTAGC GCCAGCGGTA AACAAAGCGG TTATGAAGAA AAGATTAATT GGCTGCGCAA AATCTTGCAG TGGCAAGAAG ATGTGGCCGA AAGCGGTAAC TTAGTCGATG AAGTTCGTAG TCAGGTATTT GAAGACCGTG TCTATGTGTT TACTCCAAGC GGCGAAGTGG TTGATTTGCC ATTAGGCTCA ACGGTACTGG ATTTTGCTTA TTACATTCAC TCTCATGTGG GTCATAAGTG TATCGGTGCC AAAGTTGATG GCCGCATCGT GCAATTTACT TATCAGGTTG AGACGGGCGA GCGCATAGAG ATCATTACCT CTAAGCATCC TAATCCTAAG CGAGATTGGT TAAATCCCAA CTTGGGCTAT ATTCGTACTT CTCGTGCAAG GTCAAAAATT CTGCACTGGT TTAAACAGCA AGATAGAGAT AAAAATATCA TTGCTGGGCG TGAGATGCTT GAAACCGAAT TAACCAAGAG TCAGTTGCAT ATTAAAGATG CGCAATCTGC GGTTGAGCGA TTTAATCTAG TTAGTATGGA CGATCTGCTC GCGGGGATTG GTGGTGGTGA TATTCGCCTT AACCAAGTGG TAAATCATGT TCAGAGTCGC CTGCGGACTA AAGAGCTCAG TGATGAAGAG GTGGTTGAAG ATTTAGTCAA GAAGAGCCAA AGCAAGTCGG TTAAAAAGGC CAAAGGCCAA GTTGAGGTTA GCGGCGTTGG TAACTTGATG AGCCATATCG CTAAATGTTG TCAGCCCGTA CCAGGCGATG AAATTTTTGG CTTTATTACT AAAGGCCGCG GTATTTCAGT ACACAGAGCC GATTGTGACC AAGTTAAAGA GTTAGTTCGG GCCTCACCAG AGCGTTCAGT TGAAGTGGTG TGGGGCGAGA ACTATTCCGG TGGCTATAAA ATTCGCTTAA GTATTTTGGC TAATGACCGC TCAGGACTGC TGCGAGACTT AACCTCAGTG CTAGCGGCAG AGAAAACCCA CGTGATGGCG ATGAGTTCGA CCTCTGATGT GAAAACACAA ACCGCCACCA TAGAGTTAGA GCTTGAACTA TATAATCTAG AGGGTTTATC AAAAGTGTTA TCCAAGATAA ATCAGGTTGA TGGGGTCATG CAGGCCAGAA GACTGTAA
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Protein sequence | MVSVREAHFS DPDFQLEEWV QRYISDASEA QILLALIERV ELLVGQKKDA NVTVLKRARE MIEILAPLNM DIETLQAAIL FVVFDAGLIT QEDIEEEFGA KLAVLVSSVE TMNAIGALKV DNQTRSGEPQ IDNIRKMLLA MVEDVRAVVI KLAERICLLR EIKNADEEVK VLVAREIADI YAPLANRLGI GQLKWELEDI SFRYLHPQTY KDIAKQLDGK RLDRETFIDD FVSQLQARLD KDLIRAKVYG RPKHIYSIWK KMKGKQLKFD ELFDVRAVRI VTDRLQDCYG ALGVVHTLWH HIPREFDDYV ANPKPNGYQS IHTVVVGPED KTVEIQIRTE QMHEDAELGV AAHWKYKEGS ASGKQSGYEE KINWLRKILQ WQEDVAESGN LVDEVRSQVF EDRVYVFTPS GEVVDLPLGS TVLDFAYYIH SHVGHKCIGA KVDGRIVQFT YQVETGERIE IITSKHPNPK RDWLNPNLGY IRTSRARSKI LHWFKQQDRD KNIIAGREML ETELTKSQLH IKDAQSAVER FNLVSMDDLL AGIGGGDIRL NQVVNHVQSR LRTKELSDEE VVEDLVKKSQ SKSVKKAKGQ VEVSGVGNLM SHIAKCCQPV PGDEIFGFIT KGRGISVHRA DCDQVKELVR ASPERSVEVV WGENYSGGYK IRLSILANDR SGLLRDLTSV LAAEKTHVMA MSSTSDVKTQ TATIELELEL YNLEGLSKVL SKINQVDGVM QARRL
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