| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1180 |
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| Symbol | |
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| ID | 5661579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1430564 |
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| End bp | 1433353 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235732 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_001501042 |
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| Protein GI | 157961008 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.175711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATG CCAAGAATAT GACCAAGTAC AGCCTTCGTT CGTGGGTTCT GGTATTGGCG
TTAGCCCCTA CAATTTTAGT GGGTATCTTA TTGGGTGGCT ATTTTACCAT AAATAGATTC
TATGAACTTG AAGATACGCT CATAGAACAA GCAAGTAATA TCATCGAGCC CTTGGCAATT
GCCTCCGAGG TGGGGCTTGA AAGCAAAGAT TTCGAAACCA CCAAGAGACT AATCACCTCT
GCACAATTGA ATAAGGCATC ATTAGTACAG TTTATCGCTA TCTTCGATGC TAATAACCGG
GTTGTCATCA CCTCTCATCA TTATAAAAAT CACGAAGTCA TGCGCTTCGA CAAACCCTTA
GACTCGATGC TACGCACCGA ACTTGAACAA GTCGGCGACA GTATGATTTT GCGCTCTCCC
ATTTTTAAGA GCAGTAATAT TCCAGTTCAA GACTTAGATA GGGATCCACA AGCTAATCCT
GACATCGCAA AAATTGGCTA TATCGCCATC CTTATTAATA AGGAAAATGC ACTACTGCAG
CAGCACAGAG CTGCCGTAGC CGCCTTTATT ATTGTATTAA TTGGTGTGCA GCTAAACCTC
TTCTTCACCT TCCGCCTACT TAAAAACGTG ACCCAGCCTA TTACCGACAT GGTTCGCGTG
GTGGCCAAAA TTCGAGAAGG AAAACTCGAT ACCCGGTTAA CGGGTAACTT GATTGGTGAG
CTGGATCTGC TTAAGCGCGG TATTAACGCC ATGGCAGGCT CTTTGTCTGA GTACCACGAT
GAGATGCAGC AAAACATCGA TCAGGCCACT TCTGATTTGC GTGAAACACT GGAACAGATA
GAGATCCAAA ACGTCGAACT GGATATGGCA AAGAAACGCG CTCAAGAAGC GAGTCGTATC
AAGTCTGAGT TCTTGGCGAA TATGTCACAC GAACTGAGAA CCCCCCTTAA CGGTGTGATT
GGCTTTGCCA AACAGCTACT AAAAACCCCA CTTCACTCGA GTCAACAAGA CTATATTCGC
ACCATAGAGC GCAGCGCTAC CAACCTACTG AGTATCATTA ACGACATTCT CGATTTTTCT
AAGTTGGAAG CGGGTAAGAT GGTGCTAGAA AATATCCCCT TCTCGCTGCG TGAAACCATA
GAAGAAACGG TAACCATGCT GTCGAGCAGC GCACGGGAGA AAGAGTTAGC CTTGGTCATC
GATGTCGACG CTCGTATTCC AGAGGATGTC TCTGGCGACG CCATGCGCTT TAGCCAAATC
ATTACCAACC TAGTGGGTAA TGCGATTAAA TTTACCGATA AAGGCAGCGT GCAATTAAAG
CTACAGCTTG AAGAGGTCAA AGACGGAAAG GTACATATAC GTTGTGAGAT CATAGATACA
GGCATAGGGG TCGATGAGCA GCAACAATCC TCTCTATTCC AGGCCTTTGG TCAAGCAGAC
TCCTCGATAT CACGTCGTTT CGGTGGTACA GGATTAGGGC TGGTGATCAC CAAACGATTA
GTTAACCGCA TGGGCGGCCA AATAGGCTGT TATTCAGAAC CTAACCAAGG CTCTACATTC
TGGTTCTCGC TACCGCTTAA TATTAGCCAA TATTCAATCA ATGACACTTT GCCGCTGTCG
ACGCTTGAAG GCAAAAGTAT CATGCTATTT GAGCCTAACG GCCTTACACA GCATGCGATT
GAACGTATGT TGCTGCGCTG GGGCCTAAAA GTCACTATTG CAAAAAATAT CAAACAATTA
GAATTTGTCC TTACTCAATC TAATCATGTC TTTGATTTCG GCCTAATGAG CTGCCGCGCT
GTCACTACAA CCTCACAGCC AGCGAATGCA CTGAAGCTGG CAAAGTCAAA GATCGATTAC
CTACTGCTTA TCTCCGATTG TATCGAACAA GAGGATGTTT TCTCCCAGAT TCGGCCTTAT
ATAGATAAAC AGCTTTCGAT GCCCGTCGGC GAAAAGTTAT TATCGAGCTC ACTATTGGAT
CCACACTCCT CGGTTTTAAA CGATAACTTA ATAGCATTAA CACCTCTATC CGCCCCTATA
AAACAGGAGA ACTTAAGCGT ACTTGCTGTC GATGATAATC CGGCTAATCT AAAACTGATT
GATACCTTAC TAAAAGAATT AGTGACACAG GTACAGGTTG CAGATACTGG AGAGCTAGCC
GTAAAGCTCG CAAAAGAGCG CAGCTACGAC TTAATCTTTA TGGATATTCA GATGCCCGGC
ACAGATGGAA TTACGGCGAC CAAACAGATC CGAGCCAACT CGGCAAACCG TAACACCCCC
ATTATTGCGG TCACCGCTCA TGCTATCGCC GAAGAAAGAG AAAGGATCAC CTCCAGCGGC
ATGGATGGTT ACTTGCCAAA GCCTATCGAT GAAGCAGCCC TTAAAGGCGT CATTACTCGC
TGGAAGACCA AACCTAAGTT TACCCATTTC GAACAGCGCA CACTTAATTG GGAACTTTGT
TTGACCCAAG CGAATAACAA GCCAGACTTA GCACTGGATA TGCTAAAGAT GTTGTTAAAG
TCGCTACCTG AGACTGTTGA GCACATAGAG TTAGCACTCT CGAATTCAGA TAATGACAAA
ATGCTTGCCA GCATCCATAA GCTTCATGGT GCCAGCTGTT ACTGCGGGGT ACCAACGACC
CAATCACTTT GCCAAGAAAT TGAGTCGAGC TTAAAGCGCG GCGTATCGGT GGAAGATGTA
GAACCGGAAA TACTAGAGTT ACTTGACGAG CTAACTAAGG TAGAATCTGC CGCTAATCAA
GTGATCTCCC AGCTATCAGT GGATATATAA
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| Protein sequence | MNDAKNMTKY SLRSWVLVLA LAPTILVGIL LGGYFTINRF YELEDTLIEQ ASNIIEPLAI
ASEVGLESKD FETTKRLITS AQLNKASLVQ FIAIFDANNR VVITSHHYKN HEVMRFDKPL
DSMLRTELEQ VGDSMILRSP IFKSSNIPVQ DLDRDPQANP DIAKIGYIAI LINKENALLQ
QHRAAVAAFI IVLIGVQLNL FFTFRLLKNV TQPITDMVRV VAKIREGKLD TRLTGNLIGE
LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI EIQNVELDMA KKRAQEASRI
KSEFLANMSH ELRTPLNGVI GFAKQLLKTP LHSSQQDYIR TIERSATNLL SIINDILDFS
KLEAGKMVLE NIPFSLRETI EETVTMLSSS AREKELALVI DVDARIPEDV SGDAMRFSQI
ITNLVGNAIK FTDKGSVQLK LQLEEVKDGK VHIRCEIIDT GIGVDEQQQS SLFQAFGQAD
SSISRRFGGT GLGLVITKRL VNRMGGQIGC YSEPNQGSTF WFSLPLNISQ YSINDTLPLS
TLEGKSIMLF EPNGLTQHAI ERMLLRWGLK VTIAKNIKQL EFVLTQSNHV FDFGLMSCRA
VTTTSQPANA LKLAKSKIDY LLLISDCIEQ EDVFSQIRPY IDKQLSMPVG EKLLSSSLLD
PHSSVLNDNL IALTPLSAPI KQENLSVLAV DDNPANLKLI DTLLKELVTQ VQVADTGELA
VKLAKERSYD LIFMDIQMPG TDGITATKQI RANSANRNTP IIAVTAHAIA EERERITSSG
MDGYLPKPID EAALKGVITR WKTKPKFTHF EQRTLNWELC LTQANNKPDL ALDMLKMLLK
SLPETVEHIE LALSNSDNDK MLASIHKLHG ASCYCGVPTT QSLCQEIESS LKRGVSVEDV
EPEILELLDE LTKVESAANQ VISQLSVDI
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