Gene Spea_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1167 
Symbol 
ID5661566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1411838 
End bp1412797 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID641235719 
Productthiamine-monophosphate kinase 
Protein accessionYP_001501029 
Protein GI157960995 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00022874 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAAT TTCAATTAAT CGAAAGTTTC TTTACTGGGC GTGCCCAGTC CCGCAAAGAT 
GTCGTTGTTG GTATTGGCGA TGATTGCGCC ATTGTTCAGC CAGCAGACAA TAAATCTATT
GCCATCTCTT GTGACACCTT AGTGGAAAAT GTCCACTTCT TCCCCGATAT GCCAGCAGCC
GATCTCGGTT ATAAGTCCTT GGCGGTGAAT CTATCAGATC TAGCCTCTAT GGGCGCAGAG
CCTGCATGGA TGACATTGGC ACTGACACTA CCTGAGGTCG ATGAAACCTG GCTGGCTGAA
TTCAGTAGCG GCCTGTTTGA TATTGCCGAG TATTACGGCG TGGCATTGAT AGGGGGGGAT
ACGACGCGTG GTCCTCGCTC AATTACCATC ACCATCAACG GCCAACTTCC AAATAATATC
GGCTTGACCC GCAGCGGCGC TAAAAATGGT GATTGGATCT ATGTGACGGG CACTTTAGGT
GATTCAGCAC TGGGTTTAGA TCTACTGAGA AATAAAGCCG AAGCGAATGC AGAGGACAGA
GCCTATCTTA TTCAACGTCA TTATCGACCG ACACCGAGAG TATTAGCTGG TCAGTCGCTT
AGAAATATCG CCTCAAGTGC CATCGATATC TCAGATGGCA TCATGTCAGA TATTCAGCAC
GTGCTGAAAG CCTCTAATGT GGGCGCAGTA ATAAACGTCG ACAATATTCC ATTGTCTGAG
CCACTTAAAG CCAGTGTTTC ACCAGAGATG GCACTCAGTT ATGCGCTGAC AGGCGGTGAA
GACTATGAGT TGTTGTTTAC CGTCAATGAA GCGCAAAAAG GCATGCTAGA AGTCGCCTTA
GCCGAGTCAG GAGTTAAGTT TACTCAGATA GGGCAGGTGT GCACGGGTGG CCAGTTAAAG
CTGCTTAGCG ACAATAAACC GTTTGAACCG ATAAACTTAG GTTTTGAGCA CTTTAATTAA
 
Protein sequence
MKEFQLIESF FTGRAQSRKD VVVGIGDDCA IVQPADNKSI AISCDTLVEN VHFFPDMPAA 
DLGYKSLAVN LSDLASMGAE PAWMTLALTL PEVDETWLAE FSSGLFDIAE YYGVALIGGD
TTRGPRSITI TINGQLPNNI GLTRSGAKNG DWIYVTGTLG DSALGLDLLR NKAEANAEDR
AYLIQRHYRP TPRVLAGQSL RNIASSAIDI SDGIMSDIQH VLKASNVGAV INVDNIPLSE
PLKASVSPEM ALSYALTGGE DYELLFTVNE AQKGMLEVAL AESGVKFTQI GQVCTGGQLK
LLSDNKPFEP INLGFEHFN