Gene Spea_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1165 
SymbolribH 
ID5661564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1410766 
End bp1411242 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content46% 
IMG OID641235717 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001501027 
Protein GI157960993 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000356468 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAG TTCAAGGTAA TATCGAATCG AAAAACGCCA AAGTTGCGAT CGTAGTTTCA 
CGTTTTAACA GCTTTGTTGT TGATAGTTTA CTCGATGGCG CGGTTGACAC TCTTAAGCGT 
TTTGGCCAAG TTGCAGATGA AAACATCACT GTAGTTAAAG TGCCAGGCGC TGTTGAACTG 
CCACTGGCTG CACGTCGTGT TGCGGCGAGC GGAAAATTTG ACGGAATCAT CGCACTAGGT 
GCGGTAATCC GTGGTGGTAC ACCTCATTTC GATTTTGTAG CAGGTGAATG TAATAAAGGT 
TTGGCTCAGG TTGCACTTGA GTTCGATATC CCAGTTTCAT TCGGCGTATT AACCACAGAT 
ACCATTGAAC AAGCTATTGA GCGTTCGGGT ACTAAAGCAG GTAACAAGGG CGGTGAAGCT 
GCACTTGGTC TGCTAGAGAT GGTTAACGTT CTGCAAGCAC TTGAAGAACA GCTGTAA
 
Protein sequence
MNVVQGNIES KNAKVAIVVS RFNSFVVDSL LDGAVDTLKR FGQVADENIT VVKVPGAVEL 
PLAARRVAAS GKFDGIIALG AVIRGGTPHF DFVAGECNKG LAQVALEFDI PVSFGVLTTD 
TIEQAIERSG TKAGNKGGEA ALGLLEMVNV LQALEEQL