Gene Spea_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1164 
Symbol 
ID5661563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1409517 
End bp1410620 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content49% 
IMG OID641235716 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001501026 
Protein GI157960992 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000468547 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAC ATAGTATAGA AGAGATCATT GAAGATATTC GTCTAGGTAA GATGGTCATC 
TTGATGGATG ACGAAGACAG AGAAAATGAA GGCGATCTCA TCATGGCAGC CGACATGGTG 
ACGCCAGAAG CGATTAATTT CATGGCGACT TTTGGCCGTG GCCTGATTTG CCAGACATTG 
ACCAAGGCTC GTTGTCAGCA ACTTAGCCTG CCTTTGATGG TGACTAACAA CAGCGCGCAA 
TTCTCGACTA ACTTCACCGT TTCAATTGAA GCGGCCGAGG GCGTAACTAC CGGTATTTCG 
GCGCAAGACC GCGCGGTAAC AGTATTAGCG GCGGTAGGTA AAGATGCTAA GCCATCAGAT 
ATTGTTCAAC CAGGACATAT CTTCCCATTG ATGGCACAGG AAGGCGGCGT ACTCATTCGC 
GCAGGCCACA CCGAAGCTGG CTGTGATATT GCACGTCTTG CAGGCTTTGA GCCTTCATCG 
GTTATCGTTG AAATCCTTAA TGACGACGGT ACCATGGCGC GTCGCCCAGA TCTTGAAATC 
TTTGCACAGA AGCACGGTTT GAAGATGGGC ACCATTGCCG ACCTTATCGA ATACCGTAAT 
ACCAAAGAAA CCACAGTCAT TCGTGAAGCC AAATGTAAAC TGCCAACTCG TTTTGGTGAG 
TTTGAGATGC TGACTTACCG CGATACTATC GACAACCAGT TGCATTATGT GTTGGTTAAA 
GGCGAAGTTT CAGACAACAC TTTAGTGCGT GTACACCTGC AAAATACCTT CAATGACTTA 
TTGCACTCAG AGCGCGATCA GCAACGCAGC TGGCCGCTAG AGAAAGCGAT GAAGCGCATC 
AGCGAAGAGG GCGGTGTGTT GGTGTTACTG GGTCATCAGG AACATAGCAG CGATATTCTC 
GCTAAAGTTA AAGCGTTTGA AGCCGAAGAC AACGGCAGTA CGCCAGCTGC AGCACCGTGG 
AAGGGGACTT CGCGCCAAGT AGGTGTTGGC TCGCAAATCT TAGCTGACGT AGGCGTGACA 
TCTATGCGTC TATTGAGCTC GCCGAAGCGT TATCACTCTC TTTCAGGCTT CGGATTAGAA 
GTAACTGAAT ATATTGCAGA TTAA
 
Protein sequence
MALHSIEEII EDIRLGKMVI LMDDEDRENE GDLIMAADMV TPEAINFMAT FGRGLICQTL 
TKARCQQLSL PLMVTNNSAQ FSTNFTVSIE AAEGVTTGIS AQDRAVTVLA AVGKDAKPSD 
IVQPGHIFPL MAQEGGVLIR AGHTEAGCDI ARLAGFEPSS VIVEILNDDG TMARRPDLEI 
FAQKHGLKMG TIADLIEYRN TKETTVIREA KCKLPTRFGE FEMLTYRDTI DNQLHYVLVK 
GEVSDNTLVR VHLQNTFNDL LHSERDQQRS WPLEKAMKRI SEEGGVLVLL GHQEHSSDIL 
AKVKAFEAED NGSTPAAAPW KGTSRQVGVG SQILADVGVT SMRLLSSPKR YHSLSGFGLE 
VTEYIAD