Gene Spea_1161 details

Gene Information

• Locus tag: Spea_1161
• Symbol: nrdR
• ID: 5661560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1407071
• End bp: 1407520
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641235713
• Product: transcriptional regulator NrdR
• Protein accession: YP_001501023
• Protein GI: 157960989
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000702599
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTGTC CATTTTGCAG CGCAACTGAC ACAAAAGTGA TTGATTCGCG ATTAGTCGCT 
GACGGCCATC AGGTGCGTCG ACGTAGAGAG TGTGTTCAGT GCCACGAACG TTTTACCACT 
TTCGAAGGGG CCGAGCTTGT GATGCCTCGT GTGGTGAAAC AAGATGGCAG TCGCCAGCCG 
TTCGATGAAG AGAAGCTGCG CGGCGGTATG TTAAGAGCCG TAGAGAAAAG ACCTGTCTCT 
ATGGATCAAA TTGAGCAGGC ATTGACTAAG ATTAAGTCGA CTTTGCGCGC CACCGGTGAG 
CGTGAAGTGA AATCTGAAAT GATTGGCAAC TTGATGATGG ACCAATTAGT TAACCTAGAT 
AAGGTTGCCT ATATTCGTTT CGCGTCTGTT TATCGTGCCT TTGAAGATGT TTCAGAGTTT 
GGTGAAGCGA TCGCTAAACT GCAAAAATAA 

 

Protein sequence

MHCPFCSATD TKVIDSRLVA DGHQVRRRRE CVQCHERFTT FEGAELVMPR VVKQDGSRQP 
FDEEKLRGGM LRAVEKRPVS MDQIEQALTK IKSTLRATGE REVKSEMIGN LMMDQLVNLD 
KVAYIRFASV YRAFEDVSEF GEAIAKLQK