| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1156 |
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| Symbol | |
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| ID | 5661555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1399553 |
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| End bp | 1400665 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235708 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001501018 |
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| Protein GI | 157960984 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000311518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCAT CCTATTTCCT TTTACCCCTG GCATTAATTA TTGCGGGAGC ATTTACCTTC
AGTAGTCTGT CTGAAGCTAA GCGTGCCGAC TCAAAAGATA GGCCAGTTCG AACCGTTCCA
GTGGTCACGG GTATCGTTGA ACAACATGAT CTCACTCAGT CTCTCTCCCT GATTGGTAAA
CTCGACGCCG AGCAGTCAGT ATTTATCTCG CCGCAAATTG CCGGCAAGAT TAAATCGATT
CAAGTCAGCA CCGAGCAAGA GATAGCCCAA GGCCAAATCC TAATCCAGCT CGATGATGCT
AAAGCACAAG CCGCCCTAGC CGAATCAGCC GCTTACCTAG CCGATGAAAA GCGTAAACTC
AAAGAGTTCC TCAAGCTAAT CGATCAAAAC GCGATCACTA AGACAGAGAT CGATGCTCAA
AAAGCCAGTG TCGATATGGC TACAGCTCGC TTAGCTGCCG CCCAAGCCGA TCTCGATTAT
CACTACCTCA GCGCGCCCTT TTCTGGTACA GCTGGTCTTA TCGACTTTAG CCAAGGCAAA
ATGGTCAGTG CAGGTACCGA GCTACTCACC CTCGATGACC TTTCGAGTAT GCGCCTCGAC
CTTCAGATAC CGGAGAATTA CCTCTCACAG CTTAGTGTTG GCATGTCTGT AACGGCTAGT
AGCCGTGCTT GGCCACAAAA ACAGTTTATC GGCAAGGTGA TAGCCATCGA TTCCCGTGTC
AATCAAGACA CCCTAAACTT GAGAGTTCGT GTGCAATTTG ACAACCCTAG CCATCGACTC
AAACCCGGCA TGATGATGTC GGCAACCTTG ATGTTCCCAA GTGTTGCGGA GCCAGTTATC
CCAGTGCAAG CGTTAGAGTA TTCGGGTACC AACCGTTTCG TTTATGTGGT TGGTAAAGAC
GGCATCGCCA AGCGTACCAA GGTGACGCTA GGTGCTCGCA TCGAAGACCA AGTACTAATT
AGCAATGGCC TCACTATTGG CGATAAAGTG GTAGTGCAGG GCTTAGTCAA TATGCGTGAT
GGTCTGCGCG TCGATGATCT GGGCGGATCA GCACTGGCAC AAAAAGACGC AGATAAAAAA
GCTGACGAGC AACAAGCAAG AGGAAACATC TAA
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| Protein sequence | MRSSYFLLPL ALIIAGAFTF SSLSEAKRAD SKDRPVRTVP VVTGIVEQHD LTQSLSLIGK
LDAEQSVFIS PQIAGKIKSI QVSTEQEIAQ GQILIQLDDA KAQAALAESA AYLADEKRKL
KEFLKLIDQN AITKTEIDAQ KASVDMATAR LAAAQADLDY HYLSAPFSGT AGLIDFSQGK
MVSAGTELLT LDDLSSMRLD LQIPENYLSQ LSVGMSVTAS SRAWPQKQFI GKVIAIDSRV
NQDTLNLRVR VQFDNPSHRL KPGMMMSATL MFPSVAEPVI PVQALEYSGT NRFVYVVGKD
GIAKRTKVTL GARIEDQVLI SNGLTIGDKV VVQGLVNMRD GLRVDDLGGS ALAQKDADKK
ADEQQARGNI
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