| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1127 |
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| Symbol | |
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| ID | 5661526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1364663 |
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| End bp | 1365364 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235679 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001500989 |
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| Protein GI | 157960955 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0116545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAA TAACAGACAG ACTCGCAATC GCCCAGAGCC GGATTGCACA AGCGGCGCAA
AATTCTTCTC GCCGAGCAGA AGATGTACAA CTCCTTGCCG TGAGCAAAAC AAAACCCAAT
AACCAGATCA TTGAAGCCTA TCATGCGGGT CAGCGTCGCT TCGGCGAAAA CTATGTGCAA
GAGGGCGAAT CTAAGGTCAA TGCACTTAGC GAAGACTACC CAGATATTGA GTGGCACTTT
ATCGGGCCAC TACAATCAAA CAAAACCAAA GTGGTTGCGA CACTGTTTGA CTGGATGCAT
ACAGTCGAGC GTGAAAAAAT CGCCCAACGG CTGAATGAGC AGCGCCCGGA CTCGATGCCG
CCGATCAATG TGTGTATTCA AGTCAACATC AGCCAAGAAG CGAGTAAGTC TGGCGTCGCG
GCCAATGAAA TATTGGCTCT CGCAGACAAG ATTGCCCAGA TGCCTAATCT GACTCTTCGC
GGCTTGATGG CTATTCCATC GGCCGATGTC GATGAACAAA CGGCCACAGA TGAAATGGCA
GCCTTGCAGG CACTGTATAA CCAATTGGCT CAACGCTTTG ATTATGTCGA TACCCTGTCT
GTTGGCATGA GTAATGACCT AGAGCTTGCC GTTGCCCATG GATCAACCAT GGTGCGTATT
GGTAGCGCTA TCTTTGGCGA GCGTGATTAC AGCAAGGCAT AA
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| Protein sequence | MTTITDRLAI AQSRIAQAAQ NSSRRAEDVQ LLAVSKTKPN NQIIEAYHAG QRRFGENYVQ
EGESKVNALS EDYPDIEWHF IGPLQSNKTK VVATLFDWMH TVEREKIAQR LNEQRPDSMP
PINVCIQVNI SQEASKSGVA ANEILALADK IAQMPNLTLR GLMAIPSADV DEQTATDEMA
ALQALYNQLA QRFDYVDTLS VGMSNDLELA VAHGSTMVRI GSAIFGERDY SKA
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