Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1125 |
Symbol | |
ID | 5661524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1363058 |
End bp | 1363606 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235677 |
Product | protein of unknown function YGGT |
Protein accession | YP_001500987 |
Protein GI | 157960953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000165213 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCAT TTAGTTTTCT GATAAGCACG GTATTCGATC TATACCTGAT GGTCGTGGTG TTACGTATCT GGCTACAATT AGCTAGAGCC GATTTTTATA ACCCTTTCAG TCAGTTTATC GTAAAGGCCA CTCACCCAAT TGTTGGCCCT TTAAGACGCG TACTGCCCTC TTTTGGCAGT TTTGATACCG CCTCTTTCGT ACTCGCAATA ACGGTTGTGG TACTTAAGTT TGTCATCTTA AGCCTGATGG CTGGTGCGGC AATTAATGTA CCTACCTTAC TGCTTGTCTC TTTAGTGTCG GTGATTAAAG AAGCCGGCGT ATTGCTATTT TGGATGCTGA TCCTACGTGC GATTTTAAGC TGGGTAAGCC AAGGCAGTAA CCCAATCGAA ATGGTAATGG GTCAGTTAAC TGAGCCGCTA CTTGCGCCAA TCCGCCGCAT TTTGCCAGCG ATGGGCGGAC TAGACTTATC ACTGCTAGTG ATGATGATTA TCCTTAACTT CGTCAATATC TTACTAGCGC AATACATACC ATTCTGGGCT AGCGTATAG
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Protein sequence | MNAFSFLIST VFDLYLMVVV LRIWLQLARA DFYNPFSQFI VKATHPIVGP LRRVLPSFGS FDTASFVLAI TVVVLKFVIL SLMAGAAINV PTLLLVSLVS VIKEAGVLLF WMLILRAILS WVSQGSNPIE MVMGQLTEPL LAPIRRILPA MGGLDLSLLV MMIILNFVNI LLAQYIPFWA SV
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