| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1109 |
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| Symbol | trmB |
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| ID | 5661508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1344730 |
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| End bp | 1345443 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235661 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001500971 |
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| Protein GI | 157960937 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000726431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACG TAACAACCGC TGAATTCAAT GAAGAGGGTA AATACCTTCG TAAAGTCAGA
AGCTTTGTGT TGAGAGAGGG CCGTCTAACT AAAGGTCAAG CTCAAGCAAT GGAGCAGCAA
TGGCCTAAAA TTGGTCTAGA TTACACTCCT GAGCCAATCG ACTTAGTTGA AGTCTTTGGC
CGTGAAGCTG ATACCGTTTT AGAAATTGGT TTTGGTATGG GCGCATCATT AGTTGCAATG
GCGAAGGCTG CACCAGAATT AAACTTTATT GGTATTGAAG TGCATAAACC TGGTGTTGGT
GCCTGTCTGG CAGAAGCTGC AGAAGCTGGC GTGACCAACC TACGTGTTTA TCACCATGAT
GCGATTGAAG TGCTCGAGAA CAGCATTGCC GAAGGCAGCC TGGCTTGTGT GCAATTATTC
TTCCCAGATC CTTGGCATAA GACTCGTCAC CATAAGCGTC GTATCGTTCA AGCGCCATTT
GCTGAATTGA TCCGTAGCAA ACTTAAGGTT GGCGGTGTAT TCCATCTAGC AACAGATTGG
GAAAACTACA GCGAGCATAT GCTGGAAGTG ATGACTGCAG CGCCTGGTTA TAAAAACCAA
TCTGCAACAG GTGATGTCGT AGAGCGTCCA GCTCACCGTC CGCTAACTAA ATTCGAAGCG
CGTGGCCACC GTTTAGGTCA TGGTGTTTGG GATCTTATGT TTGAGCGCGT TTAA
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| Protein sequence | MSDVTTAEFN EEGKYLRKVR SFVLREGRLT KGQAQAMEQQ WPKIGLDYTP EPIDLVEVFG
READTVLEIG FGMGASLVAM AKAAPELNFI GIEVHKPGVG ACLAEAAEAG VTNLRVYHHD
AIEVLENSIA EGSLACVQLF FPDPWHKTRH HKRRIVQAPF AELIRSKLKV GGVFHLATDW
ENYSEHMLEV MTAAPGYKNQ SATGDVVERP AHRPLTKFEA RGHRLGHGVW DLMFERV
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