Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1108 |
Symbol | |
ID | 5661507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1343393 |
End bp | 1344457 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235660 |
Product | A/G-specific adenine glycosylase |
Protein accession | YP_001500970 |
Protein GI | 157960936 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000562379 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTA CCGCCTCTTT TTCAACCCGA ATTATTACTT GGTACGACAA CTTTGGTCGT AAACAGCTCC CTTGGCAAAT CGCTAAAACC CCATACAAAG TGTGGATTTC AGAGATCATG CTGCAGCAGA CTCAAGTTGC CACCGTTATC CCCTATTTCG AAAAATTCAT TGCTCGATTT CCAGATATCG ATACCTTGGC TAGTGCCGAG CAAGATGAAG TGCTGCACTA TTGGACTGGG CTTGGGTATT ACGCACGCGC ACGTAACCTG CATAAAGCAG CCCAAACAAT GCAATCACAG TTTAGTGGTG AGTTTCCAAC CGATTTCGAT GACGTTTTAG CGCTGCCCGG CATTGGCCGC TCCACCGCTG GAGCGGTACT GTCTTTATCA CTGGGGCTTA ATTTCCCCAT TCTCGACGGT AACGTTAAGC GTGTTTTGGC TCGCCACGGC GCTATCGAAG GTTGGCCTGG TAAAAAACCT GTAGAGCAAC AACTTTGGCT ATTAACTGAA AACCTAACGC CAGCAAAAGA TATCCAAAAA TATAACCAGG CCATGATGGA TATAGGTGCG ACAGTATGCA CCCGCTCAAA ACCCAACTGC GCTCAATGCC CGGTCGCCAT TGACTGTAAG GCTCAGTTAA GTGGTCGTCA GAGCGAATTC CCTGGTAAAA AACCTAAGAA AACCATTCCA GAAAAATCTG CTTGGCTGCT AGTCATTGAA GAAAATCAGC AAGTGCAGTT AGAAAAGCGT CCTCCGGCGG GTATTTGGGG CGGGCTCTGG TGCTTCCCGC AGTTTAGTCA GCGCCAAGAA TTAGATACTT ATATAAAAGA CAAACAGCTA AAGGTGATCT CAGAGCTTGA ACTAACAGGA TTTAGACACA CCTTTAGCCA CTTTCACCTC GATGTCCAGC CGGTACTCAT CCGAGCAACA GGGCATAGCG ATAACCAGAT CATGGAACAA ACTTCCACGG TCTGGTATAA CTTAACTCAT CCACCAAAAG TTGGTTTAGC CTCGGCCACC GAGCGAATTT TGGCCGACTT AGGTTCTGTA TTAAATAAGG AGTAA
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Protein sequence | MKTTASFSTR IITWYDNFGR KQLPWQIAKT PYKVWISEIM LQQTQVATVI PYFEKFIARF PDIDTLASAE QDEVLHYWTG LGYYARARNL HKAAQTMQSQ FSGEFPTDFD DVLALPGIGR STAGAVLSLS LGLNFPILDG NVKRVLARHG AIEGWPGKKP VEQQLWLLTE NLTPAKDIQK YNQAMMDIGA TVCTRSKPNC AQCPVAIDCK AQLSGRQSEF PGKKPKKTIP EKSAWLLVIE ENQQVQLEKR PPAGIWGGLW CFPQFSQRQE LDTYIKDKQL KVISELELTG FRHTFSHFHL DVQPVLIRAT GHSDNQIMEQ TSTVWYNLTH PPKVGLASAT ERILADLGSV LNKE
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