Gene Spea_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1099 
Symbol 
ID5661498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1329785 
End bp1330513 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content41% 
IMG OID641235645 
ProductSapC family protein 
Protein accessionYP_001500961 
Protein GI157960927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.693688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ATATCGTCCC ACTTAACTCT AATGATCACC TTAGAATGTG CGTTACTGAG 
TCTAAAGACT ATCGTCGCTT TGCCGATCAA CAACTCATTC CTGTTGTTTT CCACGAATTC 
CATCAATTAG CGACCGAGTT TCCACTGGTA TTTGTTAAGA ATAGCGAAAC AGGGCAGTTT 
ATTCCTGTTG CCATGATGGG AGTTAAAAAC GACTTAAACC TCTACTGCCA AACGAGTGAA 
TGGCCTGCAA TGATAAAGCC TAAAGGCTTT AATAACGCAC CGTTATCTTT AGTTAAAACC 
AGTCAGGAAA GTGACAACGT ACTTATCTGT GTCGATACAG CCAGTCCGTT AGTGACAGAA 
GTCAGCGAGA ATGCACAGCG CTTATTTAAC GATGACAAAG AGCAGAGTGA CTACCTTAAG 
AAACGTACTC AAGCACTGCT AGAAATCGCC GCATTTAATG AGCAAACAGG CAACATTTGT 
CAGTTGTTAG CATCGAAAAG TTTATTCACC GCAAAACAGC TAACAATTAA GCTAGCCGAA 
AGTCAGCAGC CAATTAACAT CGACGGCATA TATGTGGTTG ATGAGCAGGC CTTAAACCAG 
CTAAGCAATG AAGAGTTCTT ATCTTTAAAA GAAAACGGCT TACTGCCATT AATCTACGCT 
CACCTAGTAT CACTACAGCA GATCTCACGC CTGATTGAAA AGCAAAACAA CTATGATCTG 
ACTCATTAA
 
Protein sequence
MKNNIVPLNS NDHLRMCVTE SKDYRRFADQ QLIPVVFHEF HQLATEFPLV FVKNSETGQF 
IPVAMMGVKN DLNLYCQTSE WPAMIKPKGF NNAPLSLVKT SQESDNVLIC VDTASPLVTE 
VSENAQRLFN DDKEQSDYLK KRTQALLEIA AFNEQTGNIC QLLASKSLFT AKQLTIKLAE 
SQQPINIDGI YVVDEQALNQ LSNEEFLSLK ENGLLPLIYA HLVSLQQISR LIEKQNNYDL 
TH