| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1097 |
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| Symbol | |
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| ID | 5661496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1325416 |
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| End bp | 1328025 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235643 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001500959 |
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| Protein GI | 157960925 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCAT TAACCTTTAA GAAAAGTGTA CTAGCTACAA ATATCGCACT GCTGATGAGC
GGGGCTTTGT CTGTTTCTGC TATGGCGGCA GAGGCTGATG CGAAAGCTGC AGCAGCAGAC
GAAAACATTG AGAAGATTGA AGTGCGCGGC ATGCGAGCCT CAATGAAAGC CTCAATCAAT
GCCAAAAGAT TCTCTGATTC AGTGGTTGAT GCCGTAACTG CTGAAGATAT TGGTAAGTTT
CCCGATGGTG ATGTAGGTGA ATCACTAGGC CGTATTCCGG GTGTTGCCGT TAACCGTCAG
TTTGGCCAAG GCCAGCAGGT TTCTATTCGA GGAGCATCGA GCCAGCTGAC TCGAACTTTG
CTTAATGGCC ATTCAGTAGC ATCGACGGGT TGGTACGACC AACAGGCCAT CGACCGTAGC
TTTAACTACT CTCTACTTCC GCCTGAAATG GTAGGCGCAA TCGAAGTTTA TAAGTCATCA
CAAGCGGATA TTCCTGAAGG TGGTATCGGT GGTACGGTAA TCGTTAAGAC CCGTAAGCCA
CTAGACTTGG ATGCAAACTC AGTATTTATC AGCGCTAAAG GCGACTATGG CACAATCTCT
GAAGAGGTCG ATCCTGAGCT TTCTGGTTTA TACAGCTGGA AAAATGAAGA TGAAAACTTC
GGTTTCCTAC TTTCAGCTGC AGCTTCAGAA ACTAACTACC AGCGTAACGG AATTGAATCG
CTAGTCGGTT GGGGGGATAT CGTTCCTACA ACGTTTGAGC AAGAGCGTGA GCGCACAGCA
ATTAACGGTG CATTACAATA CCGCCCGACA GATAACCTAG AGTTTGGCTT GAATATCATG
ACGCTTGATA TGAAAGCTAA TAACGCCAAT ACCTCACTGT TTACCATGTT CCCTGATGAT
AAAGAAGCGG CTTGTGAGCA AACTAACGCA TCGGGCACTT GTACCTTCTA TCGTCGCGAT
GGCAAGGGCG AGAACCCAGG TTGGGCGCAA ACTTGGGCTC GTAAAGCGAG CATGGATTCA
AATACTTATG ATTTGGATTT CAAATATGAA GCGGACAGCT ACACCTTAGA AGGCCGAGTG
GGTAACACTA AGTCTGAAGG TGGTACTGAT ATGACGGCTA ACTACGGTTT CTGGTTAGGT
CAGCCTGGTG ATTATGCCGG AACTTATGAT GCGACCGGTG AGCAGATAAA AATCGATATC
GCCAATAAGT CATTTGACGC AGGAGATTTT GGTGGCCCAC TTTCTCCGGC AGGTTGGTCT
CTTAAGAAGC AGCCAAATTC AGATGAAGAG ACTTACGCAC AGTTCGACGT GACAGTCCCT
GTTGATCTAG GCGCTATCAC CTCATTTAAG ACTGGTGTTC GTTGGGCAGA CCATGACGTA
AAGCAGGAAA CTTTCCCCGC TATTGTTAAC GCCGATGTGA CGGCTAAAGA TGCATCAGCT
TACTATTCAG GAACAGTTTC TTCTGGTGCA GGCTTTACTC TACCTAAGCC AAACCTCGAT
GCAATGCTTG CAGATGCAAA CGCGGCAATT AGTGGCTTTA GCAAAGAAGG TACTGTTTAT
AAGTCTGGTT ACGGCACCAT TACCGAAGAG AACTTAGCGC TATATTTAAT GGCTAACTTC
GAGTCAGATG GTGTTCGCGG TAACTTTGGT CTACGTTATA TCTCAACCGA TGCCTCTTCT
GATTACTATA AGCTACAATC TGACGGTACT TATGCAGATA ACTTGAGTAC AAGAGATGCT
AGCTACAATG ATGTGTTACC AAGCGTAAAC GTTGCCTTTG ATGTTGCACC AGATGTGATT
ATCCGTACTT CGGCATCACA AGTTATCTCT CGTCCTAACT ATGGCGATAT GTTCGCCTCT
TCTGCGCTAG CCGGTTATAA CGACGGCACA GCGGGCAATG AAGTGGTTAA TACGGGTAAT
ATTGCACTAG AACCATTTAA AGCAACACAA GCAGATTTGG GTGTTGAATG GTACTTCAGC
CCAGATGGTC TAGTTGCTGC AACATATTTC ATTAAAGATA TCAGCTCATT CGTTACTTCA
AATCAAATCT TAGATCAAAG CATCGGTATT ATTGACCCTG ATTCTGGTGA AGATAGCTGG
ACTAAGTCGA CTAAGAAGAA TGGTACTGGT GGTCAAATTC AAGGTGTCGA GCTTCAATTG
CAAGATTCAT TTGAAAACGG CCTAGGCTAC TCAGCTAACT ATACTTTTGC AGATTCAGAT
GCACCTGCTG ATAACTATCC GGATGAAGTG AGTGTATTCT CTGATTCATC TAAGCATACA
GTTAACCTAG TGGGTTACTA CGAGATGGAA GACTTTTCTG CTCGTGTAGC TTATAACTGG
CGCAGTGAAT ACATGATCCG TGAGCTTCCA GGTTTCTACG GCAACCGTGA GCACCAAGAC
TATGGAACTG TTGATTTAAG TGCTAACTAC AACATTACTG ATTACCTATC TGTGACTTTC
GAAGTAGTTA ATCTACTTGA AGAAGATAGC GTACAGCTTG GTGTCGCTCC AGATTCTGCT
GAAGTAAAGC CAGAGCTTAA GGATGGTTAC CCAGCATGGA GCTTCGAAGG TGAAGCGCGT
TATAAGCTAG GTGTTGCATT ACGCTTCTAA
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| Protein sequence | MRPLTFKKSV LATNIALLMS GALSVSAMAA EADAKAAAAD ENIEKIEVRG MRASMKASIN
AKRFSDSVVD AVTAEDIGKF PDGDVGESLG RIPGVAVNRQ FGQGQQVSIR GASSQLTRTL
LNGHSVASTG WYDQQAIDRS FNYSLLPPEM VGAIEVYKSS QADIPEGGIG GTVIVKTRKP
LDLDANSVFI SAKGDYGTIS EEVDPELSGL YSWKNEDENF GFLLSAAASE TNYQRNGIES
LVGWGDIVPT TFEQERERTA INGALQYRPT DNLEFGLNIM TLDMKANNAN TSLFTMFPDD
KEAACEQTNA SGTCTFYRRD GKGENPGWAQ TWARKASMDS NTYDLDFKYE ADSYTLEGRV
GNTKSEGGTD MTANYGFWLG QPGDYAGTYD ATGEQIKIDI ANKSFDAGDF GGPLSPAGWS
LKKQPNSDEE TYAQFDVTVP VDLGAITSFK TGVRWADHDV KQETFPAIVN ADVTAKDASA
YYSGTVSSGA GFTLPKPNLD AMLADANAAI SGFSKEGTVY KSGYGTITEE NLALYLMANF
ESDGVRGNFG LRYISTDASS DYYKLQSDGT YADNLSTRDA SYNDVLPSVN VAFDVAPDVI
IRTSASQVIS RPNYGDMFAS SALAGYNDGT AGNEVVNTGN IALEPFKATQ ADLGVEWYFS
PDGLVAATYF IKDISSFVTS NQILDQSIGI IDPDSGEDSW TKSTKKNGTG GQIQGVELQL
QDSFENGLGY SANYTFADSD APADNYPDEV SVFSDSSKHT VNLVGYYEME DFSARVAYNW
RSEYMIRELP GFYGNREHQD YGTVDLSANY NITDYLSVTF EVVNLLEEDS VQLGVAPDSA
EVKPELKDGY PAWSFEGEAR YKLGVALRF
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