| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1093 |
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| Symbol | |
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| ID | 5661492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1322086 |
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| End bp | 1322622 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641235639 |
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| Product | type IV pilus biogenesis protein, putative |
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| Protein accession | YP_001500955 |
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| Protein GI | 157960921 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGACT ATAAAAAAAG AATAAGCGCT TTCACTCTTG TCGAGCTAAT GGTGACTTTA
GCTGTCGCGA CAATATTAAT TACCGTCGCT GCGCCCTCTT TTAATTCTTT TTATGAAAAC
TCCCGTAGTG ACTCAGCGAT TAGAAATATA CAGCAATCAT TACAGTTAGC TAGAAGCCAA
GCTGTAAGTT ACGGTTCTAC CGTTACAGTT TGCCCATTGA GAGATGGAAC ATGCGGAACA
GATTGGCAAA ATGGTTTTAG CGTTTTTATC GATAATGGAG TACTTGGAAC ACTTGATAGC
ACAAATGGTA TAGACGATAA GGTGATCAGA GTTATAGACG GTTTTAATTC AAAGGACTTT
GTTTCTTATG ATGAAAAATC CGTTAGTTTT TCATCTGACG GTCTTATAAC TGGAAGTTTT
ACTTCTGGTG TTATTTCGTA CTGCCCAACG AATAAAACCA ATGTTAATTC GAAAGCAATT
GAATTAGGTC GAGCGGGGAA AAGTCGATTC TCATCAGCAG CTACAAGCTG TAGCTAA
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| Protein sequence | MKDYKKRISA FTLVELMVTL AVATILITVA APSFNSFYEN SRSDSAIRNI QQSLQLARSQ
AVSYGSTVTV CPLRDGTCGT DWQNGFSVFI DNGVLGTLDS TNGIDDKVIR VIDGFNSKDF
VSYDEKSVSF SSDGLITGSF TSGVISYCPT NKTNVNSKAI ELGRAGKSRF SSAATSCS
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