| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1090 |
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| Symbol | |
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| ID | 5661489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1317754 |
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| End bp | 1321338 |
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| Gene Length | 3585 bp |
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| Protein Length | 1194 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235636 |
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| Product | type IV pilin biogenesis protein, putative |
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| Protein accession | YP_001500952 |
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| Protein GI | 157960918 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGGTA AGCGAATTTT AACAGCGGTA GCATTTGCTG TAGTCGTTCT CTCTGGCGCA
AGTCATAGTG ATGATACTGA GCTCTATGTT TATGAATCGA CCGCTCGGTC TGGGGCAAGA
CCTCAAGTGC TCATTATCTT TGATAACTCA GGCAGTATGG GGAATATGGT CGATGATGCT
GAGGCATTTT ATGATCCGGA TGTCACTTAT CCTGCGGTAG GAAGTGATAA TTCTCTACAG
GAGAGAATGG TTTATTTTAC TAAAGGTGGT ATTGATAATA CAGCAATGCC TGTGCCTGAT
AGCCCATCAG AAAGCCGTCG TTTTTTATCA GAGATAAACG GTTGTGAGAC CTCTTGGGAA
TATTTAAAGA ATTACGGTGT GTTTACCGGT TTTTTCAGGG AGTATGGCTT TTCAGGGCAA
AATGGGACTT GGCAGGAAGT GCCCGATAAC AATGGCGCTA ATATAACTCA TATTGATTGT
TTCGATGATA TTGAAGGTAA AAAATGGCGT AATGCTCCTA ATCAACCTTC AGGGTTTCCA
ATTGATAGTG CTGGTAATAA GAAAAATCCA ATTCGCTATG CCGAGGTTAA TGCTAGTTCA
ACCACTGCTG AAATTGATGC AGCACATACA AAAGCACAGC AGACTGGCTT TGGTACAGGT
CAATCAATAA CCCTCTATAC CGATAACTAT TTACGCTGGT ATCACGGCGA CCAAGAAAGT
GTACCTCAGA CCCGTTTAGC AATCGCAAAA GAAGTGATTA AAAATACCAT TGTCACAACG
CCAAGTGTGG ATTTCGGCTT AGCTATTTTT AACATTAACT ACCCTCGAGA GGGGGATGGT
GATGGTGGAC GGATTATCTC TGGTATAAAG GTGATGAACG AAGCGAATAA AATCTCTTTA
CTGGAAACCA TTGATAACTT ACCAGCATCG ACCAATACGC CGTTATGTGA AACCCTTTAT
GAAGCCTATC GCTATTTTTC TGGTAAAAGC GTTTATTTCG GTGACGACGA TTATAATGTC
GGTAACTTAG GTTATAAAAA GAATATCCCC CCTCGCGACA CGCACAAGGA TGTTGAATCT
GACGGGAAGT ATGTTTCGCC TTTTAAAGAA TGCCAGAACA GAGCCTATGT CGTGTATATA
ACCGATGGTG TTCCGACATT AGACAATAAT GCTGATCAAA AAGTATTGGA ATTACCCGGC
GTAAGCTCTA GCGACAAATT TATAAACACT AGCCCCTCTT TTACCAGTTA CCTGCCAGCG
TTAGCTGGCT GGATGAATAC TAATGATGTC AATACATCTG AAGCCTATCC TGATGACCAA
AATGTAACGA CATTTACGAT AGGCTTTAGT GAAGGCGCTG ATGCGGCTGC CGCGCTCCTT
AAGAAAACGG CAGAGAAAGG GGGGGGAGAG TACTTTCATG CAGCGGATGC GTCCGCTTTA
CAGGCAGCAT TACAACAGGT CTTTTCTCAG ATCTTGGAAG TTAACGCAAG CTTTACCTCT
CCCTCTATAG CTAGCAATAA TTTTGACAGA ACACGAACCT TTGATTCCGT CTACTATGCG
ATGTTTTTAC CGAATAAAGG GCCGAGGTGG TCTGGTAACT TGAAAAAGTT CAGAGTAACA
GGTGATGGTG ATATCGTCGA TAAGAGTGGG GCTAATGCTT TAGGCAACGA TGGTAATTTA
GTGTCATCGG CGTGTTCTTA TTGGACATCA GATTCTACCT GTGCCTCAGC TAGTGATGGT
GGTGACGGTA ATGACGTTAG AGTTGGTGGG GCAGCAGACT CTATAGGATA TATACAGAAG
AGAAAACTAT TGAGTAATAT CGGCACTAAT GGTGCTATGG CGACATTTAA TAAGTCTAAC
GCATCTAGTT ATGCGGGGGG CGATGCTAAA CTTTCATTGC ATATGGGAGT GGATGAAACC
CAACTGGAAG ATATGTTTAA TTGGGCAAAA GGCTACGATG TCGATGATGA TAATGGTAAT
TCACAGACAG ATGATGCCCG TGACGAACTA ATGGGTGACC CACTTCATTC TCGGCCATTA
GCGATCAACT TTGGTACAGC TAACATACCT GATATTCGTA TCATTATGGG AACCAATCAT
GGTTTTTTGC ATATGTTTAA GGATGAAAAT GAAACCGTTA GCGAGTCATG GGCCTTCATG
CCTTATGAGT TATTACCTAA TATTAGAGAG CTAAAGGCAA ATGTACCTAC GGGCGTCCAC
TCTGTTTATG GCCTAGATAG TTCACCCGTT AGTTACGTTA AGACTGGTGC ATCAGGCTTA
GATAAAGCAT GGGTCTTTGT TGGTATGCGA CGTGGTGGTA AATCTTACTA TGCATTTGAT
GTAACGACTC CAGACTCTCC TAGGTTTATG TGGAAGATTG ATCCAGATAG CGCCGGAATG
TCTGAGCTAG CACAAACTTG GTCTGAACCC GTAGTGACCC ACATCCCAGG TTGGCCTGCA
GGCAATACCG ATCCGAGTAA AGCTAAACCC GTATTAATTT TTGGTGCGGG TTACTCGCCG
TCAACCAAAG ATGGCGCTAA CGTAGGAATT CAAGACACTG AAGGTCGTGG AGTTTATATT
GTTGATGCAG AAACTGGCAC TTTAGTGCAT ACATTTGGGC CTGATTCATC ATCAAGTGCG
ACTCAGATCC CAGGGATAAC AGATAGTATT CCGAACTCAG TGGCAGTTTT AGACAGTAAC
AGCGATAAGT TAACCGATAG GATTTATGCA TCAGATACTG GCGGCAATGT TTGGCGACTA
GATTTACCAA GTGCTAACCC TAAAGATTCA ACCAATCCTT GGACAGCATT TAAATTTGCT
GATTTAGGAG GGAGTTCTTT AACAAGCGAT AGACGCTTCT TTGCTGAGCC TGTTGTTGCT
CAAACGGTTT TTACTAACTT AGCTGAAGTT GATGTGACTT ATGATGGCAC CACTACGACA
GTAAAAACTT ATCAGGACAT ACCTTATGAT GCCGTAGCTA TTGGGACAGG GCATAGGCCG
CACCCTTCAG ACAAGACTCG TCAGGATAAG CTATTTACTC TACAAGATCG TAATGTAGTA
ACACGATCTT TTAATGGAAC CAATGGAAAT ACGGTTCCAG AGCCCATTAC TTTGGTGGAT
CTTTATGATA TCACGAGTAA AGCAGCCTCT ACTGAATCGG AGGATATTAC CTTTGGTAAG
AAGTTTGGCT GGTATTATAG CCTAGGAGCG ATTGGAGAGA AGAGTCTAGC CGGCGCATCG
ATTATTCAGG GACGGGTTTA CTTTACTTCT TATGTACCCG GTGATACCTC TTCAACCAAC
CAATGTCTGA TTGCTGGAAT GGGCCGCCTA TATTCTTTTG CTTTACATAA GGGGACTCGT
ACATATACGC AAGAGTATAT TGAATTAGGG GAAAGAGTAC CAGATACGCC TCCTCCTCTA
ATCCCAGAGG GAGATATCTA TTTTCCCATT CCAGATGCTC CAAGATTACC TTGCGTTGAG
GGAGACGTAA ATTGTCCTAA ACCACCAGAT TGTCAAAATG GTGATGATAA GTGTGTTGGA
TCGGCTCTTG GGATTAACCG AATTTACTAC CATGCAAATG ACTAA
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| Protein sequence | MLGKRILTAV AFAVVVLSGA SHSDDTELYV YESTARSGAR PQVLIIFDNS GSMGNMVDDA
EAFYDPDVTY PAVGSDNSLQ ERMVYFTKGG IDNTAMPVPD SPSESRRFLS EINGCETSWE
YLKNYGVFTG FFREYGFSGQ NGTWQEVPDN NGANITHIDC FDDIEGKKWR NAPNQPSGFP
IDSAGNKKNP IRYAEVNASS TTAEIDAAHT KAQQTGFGTG QSITLYTDNY LRWYHGDQES
VPQTRLAIAK EVIKNTIVTT PSVDFGLAIF NINYPREGDG DGGRIISGIK VMNEANKISL
LETIDNLPAS TNTPLCETLY EAYRYFSGKS VYFGDDDYNV GNLGYKKNIP PRDTHKDVES
DGKYVSPFKE CQNRAYVVYI TDGVPTLDNN ADQKVLELPG VSSSDKFINT SPSFTSYLPA
LAGWMNTNDV NTSEAYPDDQ NVTTFTIGFS EGADAAAALL KKTAEKGGGE YFHAADASAL
QAALQQVFSQ ILEVNASFTS PSIASNNFDR TRTFDSVYYA MFLPNKGPRW SGNLKKFRVT
GDGDIVDKSG ANALGNDGNL VSSACSYWTS DSTCASASDG GDGNDVRVGG AADSIGYIQK
RKLLSNIGTN GAMATFNKSN ASSYAGGDAK LSLHMGVDET QLEDMFNWAK GYDVDDDNGN
SQTDDARDEL MGDPLHSRPL AINFGTANIP DIRIIMGTNH GFLHMFKDEN ETVSESWAFM
PYELLPNIRE LKANVPTGVH SVYGLDSSPV SYVKTGASGL DKAWVFVGMR RGGKSYYAFD
VTTPDSPRFM WKIDPDSAGM SELAQTWSEP VVTHIPGWPA GNTDPSKAKP VLIFGAGYSP
STKDGANVGI QDTEGRGVYI VDAETGTLVH TFGPDSSSSA TQIPGITDSI PNSVAVLDSN
SDKLTDRIYA SDTGGNVWRL DLPSANPKDS TNPWTAFKFA DLGGSSLTSD RRFFAEPVVA
QTVFTNLAEV DVTYDGTTTT VKTYQDIPYD AVAIGTGHRP HPSDKTRQDK LFTLQDRNVV
TRSFNGTNGN TVPEPITLVD LYDITSKAAS TESEDITFGK KFGWYYSLGA IGEKSLAGAS
IIQGRVYFTS YVPGDTSSTN QCLIAGMGRL YSFALHKGTR TYTQEYIELG ERVPDTPPPL
IPEGDIYFPI PDAPRLPCVE GDVNCPKPPD CQNGDDKCVG SALGINRIYY HAND
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