Gene Spea_1087 details

Gene Information

• Locus tag: Spea_1087
• ID: 5661486
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1315749
• End bp: 1316309
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641235633
• Product: type IV pilus modification protein PilV
• Protein accession: YP_001500949
• Protein GI: 157960915
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4967] Tfp pilus assembly protein PilV
• TIGRFAM ID: [TIGR02523] type IV pilus modification protein PilV; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACCA AAGAGAAAGG ACTTTCATTG ATTGAAGTGT TAGTTGCTTT GGTTATTTTG 
ACCGTCGGCT TGATCGGCGT TTTCAATCTT CATGTGATCT CTAAGCGCGG TAGTTTCGAG 
TCTTTCCAGC AGACTCAGGC CGCCTATCTC GCCAACGATA TTATTAGTCG TATCAAATTA 
AACCGTTCTC AGCTTACATC GTATGCAGGT ACTTACAGTG GCACGTTATC TATTCCGGGC 
AAACGTTGCG ATGTTTCTGT GGGGCAACCT ATTGATACCT GTAATACATT TGAGACTCGA 
TTATGGGATC TCTATCAATT GGATCAGCAA GTTTTAGGCT ACTCAGAAGT GCTTGATGGT 
AAAAAAGTTG GCGGGTTAGA TAACGCTACA GCTTGTATAG AAGCAAAGGA TAGTGGTGAG 
GTAACTGTTG TACTTAGTTG GCGTGGAATG AATAAAGTAA ATAAAGCTGG GCCTCTTCAA 
CCCGTTTTTG TGCGTGGTTG TGGTGAAAGT AAAAACAAGA ACCAGCGTCG ATTTTACTTC 
ATTAATACGG TAATTCTTTA A 

 

Protein sequence

MNTKEKGLSL IEVLVALVIL TVGLIGVFNL HVISKRGSFE SFQQTQAAYL ANDIISRIKL 
NRSQLTSYAG TYSGTLSIPG KRCDVSVGQP IDTCNTFETR LWDLYQLDQQ VLGYSEVLDG 
KKVGGLDNAT ACIEAKDSGE VTVVLSWRGM NKVNKAGPLQ PVFVRGCGES KNKNQRRFYF 
INTVIL