Gene Spea_1084 details

Gene Information

• Locus tag: Spea_1084
• Symbol: lspA
• ID: 5661483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1313634
• End bp: 1314146
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 641235630
• Product: lipoprotein signal peptidase
• Protein accession: YP_001500946
• Protein GI: 157960912
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAACTA ACTGGAAAGA CAGTGGCCTG CGTTGGTATT GGGTCGTTGT GTTGGTTTTT 
TTAGCCGACC AACTATCTAA GCAATGGGTA TTGTCGAATT TTGACCTATA TGAGTCGATT 
CAGTTACTGC CAGTGTTTAA TTTTACCTAT GTACGTAACT ATGGCGCTGC GTTTAGCTTC 
TTGAGTGATG CTGGCGGATG GCAACGTTGG TTGTTTACCT TCGTAGCAGT TGGCTTTAGC 
GTATTGTTAT CGGTTTGGCT GCGTCAGCAA CCAAGCAAGA TGTGGCGCTT AAATCTTGCA 
TACACCTTAG TGATCGGCGG TGCATTAGGT AACTTAATTG ACCGCCTACA ACATGGCTAC 
GTAGTCGACT TTTTAGATTT CTATTGGAAT ACTAGTCATT TCCCTGCATT TAATATTGCT 
GACTCGGCAA TTTGTGTTGG GGCAGGACTT ATTATTTTGG ATTCTTTTGT TGCCGGTAAA 
GACGACAAGA AATCAGATGG TATAAAGGAG TAA 

 

Protein sequence

MPTNWKDSGL RWYWVVVLVF LADQLSKQWV LSNFDLYESI QLLPVFNFTY VRNYGAAFSF 
LSDAGGWQRW LFTFVAVGFS VLLSVWLRQQ PSKMWRLNLA YTLVIGGALG NLIDRLQHGY 
VVDFLDFYWN TSHFPAFNIA DSAICVGAGL IILDSFVAGK DDKKSDGIKE