Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1075 |
Symbol | |
ID | 5661474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1299860 |
End bp | 1300957 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235621 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001500937 |
Protein GI | 157960903 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACA ACACACTAAA AGCAGTTCTG CTTACTTCGA TGTTACCTTT TGCTGCTAGC GCGGCTGATG GCATGAGCCC CTGGTATGTA GGTGGCGGTG TCGGTATCAA TAACTACCAA CCCAATTGCG ATCAAAAAAC CATGAAAAGC TGTGGTGAGG ACGACCCTTA TGCATGGGAC GTATTCGCAG GTTATTTATT TAATGACTAC TTTGGTGCAG AGCTAGGTTA TCGAGACCTA GGTCGAGCTC AGTGGGTCGA CTATTCAAAC AAGCTAAATG ACGTTGGTGC TAAAGGAATG AACCTTGGCC TAGTGGCATT TTGGCCGTTT GCTGGTGATT GGAGCCTGTC TGCCGAAGCG GGTGCCTTTA ACTACATCAT CTCCAACAAC AAGAACTATG GTAGTGAATA CTACAGCGAT AATGGCGTCG CTCCATACGT AGGAGCAGGC ATTGGTTATA ACATTACCGA TAACCTTAAA ATCCAAGCTA AGTACCGTCG TTATGAAAAC CTTGACGAAG ATAAGTGGAA AACCCTAGAG ATGGAAAGTA ACTACTGGGG GCTTGAGCTA AGTTATCGTT TTGGTAGCAA GTCAAAGCCT GCTCCGGTTG TAGCACCTGT AATAGTGGCA GACTCTGACA ATGATGGCGT GACTGATGAT ATGGATCAGT GCCCTAATAC ACCATCGACT CACAAAGTGG ATGCTAACGG TTGTACTATC TATCAAGAAG CTGAAGACAA GTTTGATATC GAAGCTAAGT TCGCTACCAA CTCCGCCACG GTACAAGAGT CATCATACGG TGATATCAAG GAGCTTGCTG AATACATGAG TCAGCACCCT AATGCCGAAG TGACTATCTC TGGTCATGCT TCAAATACAG GTAAAGCTGA TTACAATATG GCGCTTTCTG AGCGCCGCGC CGCAGCGGTT GCCGAGATCC TTATCAATGA GTACGGGGTT GCATCGAGCA AAGTATCATC TAAAGGCTAC GGTATAACTC AGCCACTGAT TGAAGGAAGC TCTGCAGAAG CAAACGAAGC CAATCGCCGT ATCGAAGCTC ATGTTACCGG CACAGAAGAA GTGCCAGTAC TTAAGTAA
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Protein sequence | MMNNTLKAVL LTSMLPFAAS AADGMSPWYV GGGVGINNYQ PNCDQKTMKS CGEDDPYAWD VFAGYLFNDY FGAELGYRDL GRAQWVDYSN KLNDVGAKGM NLGLVAFWPF AGDWSLSAEA GAFNYIISNN KNYGSEYYSD NGVAPYVGAG IGYNITDNLK IQAKYRRYEN LDEDKWKTLE MESNYWGLEL SYRFGSKSKP APVVAPVIVA DSDNDGVTDD MDQCPNTPST HKVDANGCTI YQEAEDKFDI EAKFATNSAT VQESSYGDIK ELAEYMSQHP NAEVTISGHA SNTGKADYNM ALSERRAAAV AEILINEYGV ASSKVSSKGY GITQPLIEGS SAEANEANRR IEAHVTGTEE VPVLK
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