Gene Spea_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1074 
Symbol 
ID5661473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1298619 
End bp1299575 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content44% 
IMG OID641235620 
Producttransaldolase B 
Protein accessionYP_001500936 
Protein GI157960902 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAACA CATTAGAACA ACTTAAAGCT TTCACAACAA TTGTTGCCGA TACAGGTGAT 
ATTGAAGCCA TAAAACGTTA CCAGCCAGAA GACGCCACGA CCAACCCCTC TCTTATTTTA
AAAGCATCTG AAATTCCTGA ATACAGCGCA CTTATTGAAA ACGCCATCGA CTGGGCCAAA
AGCCAGAGTG ATGTTCTAGC GCAACAGATT GAAGATGCCG GTGATAAACT TGCCGTCAAT
ATTGGTCTTG AGATCTTAAA AATTGTTCCA GGTCGTATTT CTACAGAAGT TGATGCCCGC
CTTTCATTCG ATAAAGAAGG CTCAATCGCT AAAGCACACA AGCTTATCAA GCTTTACCAA
GAAGCTGGTA TCGACAAGTC TCGTATCCTT ATTAAGCTAG CGTCAACTTG GGAAGGAATT
TGCGCCGCTA AGCAACTTGA GCAAGAAGGT ATTAACTGTA ACTTAACCTT GCTATTTAGT
TTTGCTCAGG CTCGTGCATG TGCAGAAGCC GGGGTTTACC TAATCTCTCC TTTCGTTGGT
CGTATCCTTG ACTGGTACAA GAAAGACACG GGTCTTGAAT ACAGCGCCAC GGACGATCCA
GGTGTAGTAT CAGTAACAAG TATCTATGAC TACTACAAAC GTCATGGTTT TAATACTGTA
GTTATGGGCG CAAGTTTCAG AAACACAGGC GAGATTATTG AACTTGCCGG CTGTGACAGA
CTAACCATTG GCCCTGCACT ACTAGAAGAG CTACAAAATA GCACCACGCC TATCGTACAA
AAGCTTCTTC CAGCAACCGA AGTAGTTGCT CCAGAAGCTG AAATGACTGA AGCCCAGTTC
CGTTGGGAGT TCAACGAAGA CCCTATGGCA GTAGAGAAGC TAGCCGAAGG TATTCGCAAC
TTCGCTATCG ACCAGGGTAA GCTCGAAGTT ATGCTAAAAG AAAAGCTTTC GTCTTAA
 
Protein sequence
MANTLEQLKA FTTIVADTGD IEAIKRYQPE DATTNPSLIL KASEIPEYSA LIENAIDWAK 
SQSDVLAQQI EDAGDKLAVN IGLEILKIVP GRISTEVDAR LSFDKEGSIA KAHKLIKLYQ
EAGIDKSRIL IKLASTWEGI CAAKQLEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG
RILDWYKKDT GLEYSATDDP GVVSVTSIYD YYKRHGFNTV VMGASFRNTG EIIELAGCDR
LTIGPALLEE LQNSTTPIVQ KLLPATEVVA PEAEMTEAQF RWEFNEDPMA VEKLAEGIRN
FAIDQGKLEV MLKEKLSS