Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1074 |
Symbol | |
ID | 5661473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1298619 |
End bp | 1299575 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641235620 |
Product | transaldolase B |
Protein accession | YP_001500936 |
Protein GI | 157960902 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACA CATTAGAACA ACTTAAAGCT TTCACAACAA TTGTTGCCGA TACAGGTGAT ATTGAAGCCA TAAAACGTTA CCAGCCAGAA GACGCCACGA CCAACCCCTC TCTTATTTTA AAAGCATCTG AAATTCCTGA ATACAGCGCA CTTATTGAAA ACGCCATCGA CTGGGCCAAA AGCCAGAGTG ATGTTCTAGC GCAACAGATT GAAGATGCCG GTGATAAACT TGCCGTCAAT ATTGGTCTTG AGATCTTAAA AATTGTTCCA GGTCGTATTT CTACAGAAGT TGATGCCCGC CTTTCATTCG ATAAAGAAGG CTCAATCGCT AAAGCACACA AGCTTATCAA GCTTTACCAA GAAGCTGGTA TCGACAAGTC TCGTATCCTT ATTAAGCTAG CGTCAACTTG GGAAGGAATT TGCGCCGCTA AGCAACTTGA GCAAGAAGGT ATTAACTGTA ACTTAACCTT GCTATTTAGT TTTGCTCAGG CTCGTGCATG TGCAGAAGCC GGGGTTTACC TAATCTCTCC TTTCGTTGGT CGTATCCTTG ACTGGTACAA GAAAGACACG GGTCTTGAAT ACAGCGCCAC GGACGATCCA GGTGTAGTAT CAGTAACAAG TATCTATGAC TACTACAAAC GTCATGGTTT TAATACTGTA GTTATGGGCG CAAGTTTCAG AAACACAGGC GAGATTATTG AACTTGCCGG CTGTGACAGA CTAACCATTG GCCCTGCACT ACTAGAAGAG CTACAAAATA GCACCACGCC TATCGTACAA AAGCTTCTTC CAGCAACCGA AGTAGTTGCT CCAGAAGCTG AAATGACTGA AGCCCAGTTC CGTTGGGAGT TCAACGAAGA CCCTATGGCA GTAGAGAAGC TAGCCGAAGG TATTCGCAAC TTCGCTATCG ACCAGGGTAA GCTCGAAGTT ATGCTAAAAG AAAAGCTTTC GTCTTAA
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Protein sequence | MANTLEQLKA FTTIVADTGD IEAIKRYQPE DATTNPSLIL KASEIPEYSA LIENAIDWAK SQSDVLAQQI EDAGDKLAVN IGLEILKIVP GRISTEVDAR LSFDKEGSIA KAHKLIKLYQ EAGIDKSRIL IKLASTWEGI CAAKQLEQEG INCNLTLLFS FAQARACAEA GVYLISPFVG RILDWYKKDT GLEYSATDDP GVVSVTSIYD YYKRHGFNTV VMGASFRNTG EIIELAGCDR LTIGPALLEE LQNSTTPIVQ KLLPATEVVA PEAEMTEAQF RWEFNEDPMA VEKLAEGIRN FAIDQGKLEV MLKEKLSS
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