| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1067 |
|---|
| Symbol | |
|---|
| ID | 5661466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1291627 |
|---|
| End bp | 1292562 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641235613 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001500929 |
|---|
| Protein GI | 157960895 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAA CCATTTATGC TCCAGCATCT ATGGGCAATG TCGGAGTCGG TTTCGATCTG
CTTGGTGCCG CTTTGGCACC AATAGATGGC AGCCTACTGG GCGATACCGT CAAAGTTGAA
TCTGCCGAGC AGGGGCTTTC ACTCGTTCTT GCTGGCCACT GGGCAGGCAA GCTGCCGCAA
GATGAGCGAG ACAATATTGT TTATCAATGT GCAGAGTTTT TCTTAAGTCA TTTAGATAAA
GATGTAGGCC TTAAGTTGAC CCTAGAGAAG AACTTACCTG TAGGCAGTGG GCTAGGTTCT
AGCGCGAGTT CAGTGGTTGC GGCTTTAGCG GCCCTGAACG ACTTCTTCGA TAAACCTTTC
TCTGAGCAAG ATTTACTGCG TTTAATGGGT GAGTTTGAAG GCAAGATCAG TGGTTCAATC
CATTATGACA ATGTCGCGCC TTGTTACTTA GGTGGTATGC AGCTGATGCT AGATACTCCT
AAAACAGTTT GTGAAGCGAT CCCTGACTTT AAACAATGGT ATTGGGTGGT GGCCTATCCA
GGGATCTCGC TATCGACTTC TAGAATGCGT CAGTTGATGC CAAGCGAGTT TGATAAGCAG
ACCACGATTG ATTTTGGCCG TTATCTCAGT GCGTTTGTGC ATGCTTCATA TAAGCAAGAT
GCTGAGCTAG CGATTTCAGT ATTGAAGGAT GTATTGGCCG AGCCTTATCG CGCGCCGGAA
ATTCCCAATT ATCAAAAGGC AAAGTCTGCT TTAGCCGAAT TGGGCATGTT AACCACAGGG
ATCTCTGGCA GCGGACCGAC GCTGTTTAGT ATTACCGATG ATCTCGATGT GGCCAAACAA
GCGCAGCAAT GGCTAGATGC GAACTATGTT GAGCCCGGTA AAGGCTTCTC TCATATATGC
AGAATTGATA ATCAAGGGAC TCGTCGAGTC GATTAA
|
|---|
| Protein sequence | MSVTIYAPAS MGNVGVGFDL LGAALAPIDG SLLGDTVKVE SAEQGLSLVL AGHWAGKLPQ
DERDNIVYQC AEFFLSHLDK DVGLKLTLEK NLPVGSGLGS SASSVVAALA ALNDFFDKPF
SEQDLLRLMG EFEGKISGSI HYDNVAPCYL GGMQLMLDTP KTVCEAIPDF KQWYWVVAYP
GISLSTSRMR QLMPSEFDKQ TTIDFGRYLS AFVHASYKQD AELAISVLKD VLAEPYRAPE
IPNYQKAKSA LAELGMLTTG ISGSGPTLFS ITDDLDVAKQ AQQWLDANYV EPGKGFSHIC
RIDNQGTRRV D
|
|---|
| |