Gene Spea_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1062 
Symbol 
ID5661461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1286241 
End bp1286702 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content40% 
IMG OID641235608 
Productcytochrome c class II 
Protein accessionYP_001500924 
Protein GI157960890 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.251364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTGCAAAGAT GAGCCTTATA GCACTAGCAG CAACTGCAAC GTTCGCAACA 
AGTGTTTACG CAAATAATTT TAAAGAAGCT GAAGATGCTG TCCATTACCG TCAATCTGCT
TTTAGCATGA TTGCTTATAA CTTTGGTGAC ATGGGCGCCA TGTTAAAAGG TAAGAAAGAA
TACAATGCTG AAGTATTTGC TATGCGTGCA GAAAATGTGG CTGCGCTGTC AAAGCTTCCT
CTTGAAGGCT TTATTGCTGG TTCTGATAAA GGTGATACTG AAGCCTTGGC AAAAATCTGG
AGCGACAAAG CTGACTTCGA TAACAAGATG AAAACTTTCC AAGACAATGC AGCCATTTTA
GCGACTGTTG CTAGCAAAGG GGATAAGAAA GAGATTAAGA AAGCCTTTGG TAATACAGGT
AAGAGCTGTA AAGGCTGCCA TGACGTTTAC AAGAAAGACT AA
 
Protein sequence
MKKIAKMSLI ALAATATFAT SVYANNFKEA EDAVHYRQSA FSMIAYNFGD MGAMLKGKKE 
YNAEVFAMRA ENVAALSKLP LEGFIAGSDK GDTEALAKIW SDKADFDNKM KTFQDNAAIL
ATVASKGDKK EIKKAFGNTG KSCKGCHDVY KKD