Gene Spea_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1061 
Symbol 
ID5661460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1285450 
End bp1286142 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID641235607 
Productcytochrome B561 
Protein accessionYP_001500923 
Protein GI157960889 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.114177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGAA ATGTAGTCAA AGTGAAGGTA TGGGATCTCC CGACACGGGT TTTTCATTGG 
GGTATGCTGT GTTTGCTTGG TGGATTGTGG TGGACTGCTG ATGCTGGAGA GATGGAGTGG 
CATCAGATCT TAGCCTACAT GTTGATGATA CTCATTGTCG TGAGGCTTAT TTGGGGGATT 
ATAGGAAGTG AAACAGCTCG ATTTAGTCAC TTTGTTCGCT CACCAAAAAG CGTCATCAAC 
TATCTTGGTA AAACTCGACG TGAGGGGATC TCGTCATCTC TCGGCCATAA CCCTGTAGGG 
GGCTATATGG TGGTCACACT CATCGCACTT GTTTGTGTTC AGCTCACAAC GGGTTTATTT 
GCAACCGATG AGATTTTTAC TGAAGGTCCT CTTTATTCTC TCGTTAGCTC AGATACAGCA 
AGTTGGTTAA CTTGGCTGCA TAAAAAGAAC TTCGATCTTA TTTTACTCCT CGCCGCAGTG 
CATGTGCTTG CCGTTGGGGT TCATATGTTG AAAGGGGATA AGATTTTAGG TGCGATGTTT 
AGCGGCTATA AGAAGTTACC TGAATCGATG CAGCTAGATG ACAAGAGCGA TGAACTCGCA 
TTTGTATCAA TTTTGAGAGC GCTAGTATTA GCCTTGATTA TTGGCGTCAT AGTGGTGAAC 
TATTTGATGT GGCCAGTGAT TGATATGCTC TAG
 
Protein sequence
MERNVVKVKV WDLPTRVFHW GMLCLLGGLW WTADAGEMEW HQILAYMLMI LIVVRLIWGI 
IGSETARFSH FVRSPKSVIN YLGKTRREGI SSSLGHNPVG GYMVVTLIAL VCVQLTTGLF 
ATDEIFTEGP LYSLVSSDTA SWLTWLHKKN FDLILLLAAV HVLAVGVHML KGDKILGAMF 
SGYKKLPESM QLDDKSDELA FVSILRALVL ALIIGVIVVN YLMWPVIDML