Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1060 |
Symbol | |
ID | 5661459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1284778 |
End bp | 1285140 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641235606 |
Product | sigma 54 modulation protein/ribosomal protein S30EA |
Protein accession | YP_001500922 |
Protein GI | 157960888 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.466257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGA TTACTAGCAA GCATTTCGAA GTTACTGAAT CTATCCGCGA ACGTATTGAA GCCAGATTAG AAAAGTTAGC CAGACACGAT GTGCAGCTAA TTAATCCACA CGTTATTATT CTACAGGAGA AGCAAGGGTT TAAGATTGAA GCTTCTGTGG GCATACCAAG TGCCAAGTTA TTTGCCCAGG CGAAACACGA CGACCTTTAC GCAGCAATTA ATGCAATGGG ACAAAAGCTG GAGAAACAGC TAAATCGCCT GACTCATAAA CCAGAAAGTC AACGTCACGC AACACTTAAA ATAGAAGATG ATGCCATTGA TGACGACTTT GATGATAACT TAGAGGAGGA ATACGCAGCT TGA
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Protein sequence | MIKITSKHFE VTESIRERIE ARLEKLARHD VQLINPHVII LQEKQGFKIE ASVGIPSAKL FAQAKHDDLY AAINAMGQKL EKQLNRLTHK PESQRHATLK IEDDAIDDDF DDNLEEEYAA
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