Gene Spea_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1060 
Symbol 
ID5661459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1284778 
End bp1285140 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content41% 
IMG OID641235606 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_001500922 
Protein GI157960888 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.466257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA TTACTAGCAA GCATTTCGAA GTTACTGAAT CTATCCGCGA ACGTATTGAA 
GCCAGATTAG AAAAGTTAGC CAGACACGAT GTGCAGCTAA TTAATCCACA CGTTATTATT
CTACAGGAGA AGCAAGGGTT TAAGATTGAA GCTTCTGTGG GCATACCAAG TGCCAAGTTA
TTTGCCCAGG CGAAACACGA CGACCTTTAC GCAGCAATTA ATGCAATGGG ACAAAAGCTG
GAGAAACAGC TAAATCGCCT GACTCATAAA CCAGAAAGTC AACGTCACGC AACACTTAAA
ATAGAAGATG ATGCCATTGA TGACGACTTT GATGATAACT TAGAGGAGGA ATACGCAGCT
TGA
 
Protein sequence
MIKITSKHFE VTESIRERIE ARLEKLARHD VQLINPHVII LQEKQGFKIE ASVGIPSAKL 
FAQAKHDDLY AAINAMGQKL EKQLNRLTHK PESQRHATLK IEDDAIDDDF DDNLEEEYAA