Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1053 |
Symbol | |
ID | 5661452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1275021 |
End bp | 1276112 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235599 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_001500915 |
Protein GI | 157960881 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0453685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAG ATACAATTAA CAATGTTCAT ATCAGTTCAG AGCAAGTACT AGTCACTCCA GAGGAGTTAA AGCGTGAGCT TCCTCTTTCC ACCCATGCTT ACCAGTACGT TCTCAATGCT CGCAAGACAG TATCTGACAT TGTGCATAAA CGTGATAATC GCGTATTGGT GATTTCAGGT CCTTGCTCTA TCCATGATAT TGATGCTGCC AAAGAGTACG CGCTAAAGCT TAAGAAGTTA CATGATGAAC TTGGTGATCA GTTTTTTGTG TTGATGCGAG TTTACTTCGA AAAGCCGCGT ACTACTGTTG GCTGGAAAGG AATGATTAAC GACCCTGATA TGGATGAATC CTTCGATGTG GATAAAGGCT TGAGAAAAGC TCGCGAACTG ATGATCTGGC TTGCTGAACT TGAACTGCCT GTTGCCACTG AGGCGCTCGA TCCTATTAGT CCGCAATACA TGTCGGAGTT GGTAACTTGG TCAGCCATTG GCGCACGCAC CACTGAGTCA CAGACTCACC GTGAAATGGC GTCGGGTCTT TCTATGCCGG TAGGCTTTAA AAATGGTACC GATGGCAAGC TTGGTGTGGC CATCAATGCA TTAGAGTCGG CTGCGAGTAG TCACCGCTTC ATGGGTATTA ACCAGCAAGG TCAGGTCGCA CTGCTACAGA CCGCAGGTAA CCCTGATGGA CATGTGATTT TACGTGGCGG CAAAACACCT AACTATGATG CTGCGAGTGT GGCGGAGTGT GAACAGCAGT TACATGCAGC CAAACTCAGT GCACGATTGA TTGTCGATTG CAGTCATGGT AACTCGTCAA AAGATCATAA TAAGCAAAAG CCTGTGTGCG AAGATGTTTT TAACCAGATT GTGGCGGGCA ATAAGTCTAT TATCGGTGTG ATGCTAGAAA GCCATTTAAA TGCGGGTAAG CAGAGCAGTG ACTTGCCGAT GGATGAGCTT GCTTACGGCG TTTCGGTTAC AGATGCTTGT ATCGACTGGA AAACCACAGA AGCGTTATTA CGAACGGGAG CCGATGAGTT AGCCTCGGTA TTACCGACAA GATTTGATAT GCTAAAAGTT GCAAACGGCT GA
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Protein sequence | MQQDTINNVH ISSEQVLVTP EELKRELPLS THAYQYVLNA RKTVSDIVHK RDNRVLVISG PCSIHDIDAA KEYALKLKKL HDELGDQFFV LMRVYFEKPR TTVGWKGMIN DPDMDESFDV DKGLRKAREL MIWLAELELP VATEALDPIS PQYMSELVTW SAIGARTTES QTHREMASGL SMPVGFKNGT DGKLGVAINA LESAASSHRF MGINQQGQVA LLQTAGNPDG HVILRGGKTP NYDAASVAEC EQQLHAAKLS ARLIVDCSHG NSSKDHNKQK PVCEDVFNQI VAGNKSIIGV MLESHLNAGK QSSDLPMDEL AYGVSVTDAC IDWKTTEALL RTGADELASV LPTRFDMLKV ANG
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