Gene Spea_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1045 
Symbol 
ID5661444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1267843 
End bp1268376 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID641235591 
Producthypothetical protein 
Protein accessionYP_001500907 
Protein GI157960873 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCG CCGAAGAGCA GCTATCAACC TACAAGAGCG TGCATTTAAA CCCGAAAAAC 
ATTAAGACTC ATTTCGTGGG GATCCCGCTG ATTATCTGGT CGCTATTTTT ATTACTCAAT
CTAATCCCAT TAAATTTTGC GCTATCTAAC GATCCTGTTA TCACCTTTAA TGTGGCGACG
GTTTTCACTG TTGGCGTGCT TATCTATTAT TTTGTACTAC ACGCAAGATT GGCGATAGGC
TTAACACTGT TTATTATTCC GGTGCTTTAT ACATCAGGCC TAGTGGCCCA AGTGCCTCAT
GCGATTTGGA TTGCATTAGT GGTGTTTTTT GTGGGCTGGG TGATTCAATT TATTGGTCAT
CATTATGAAA AAGCCAAGCC CGCTTTTGTT GATGACTTGA ATCAGTTACT AATTGGGCCG
TTCTTTTTGA TGGCTGAGGT GTACTTTATG TTAGGCATGG AAAAGCAGTT ATTAGCTGAC
ATAACCCCGA TGGCAAGAGA TAAGCGTCGA GCGATAGAAG CTGTAAAGAA GTAG
 
Protein sequence
MKSAEEQLST YKSVHLNPKN IKTHFVGIPL IIWSLFLLLN LIPLNFALSN DPVITFNVAT 
VFTVGVLIYY FVLHARLAIG LTLFIIPVLY TSGLVAQVPH AIWIALVVFF VGWVIQFIGH
HYEKAKPAFV DDLNQLLIGP FFLMAEVYFM LGMEKQLLAD ITPMARDKRR AIEAVKK