| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1040 |
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| Symbol | |
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| ID | 5661439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1262750 |
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| End bp | 1263487 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235586 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_001500902 |
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| Protein GI | 157960868 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.526796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGGA TCTTATTGGG CGTTAACATC GATCATATTG CGACTCTACG TCAGGCACGC
GGGACCAATT ATCCAGATCC AGTTCATGCT GCAGCCGTAG CAGAGCATGC TGGCGCAGAA
GGTATTACTA TTCATTTACG TGAAGATCGC CGTCATATCA TCGACCGCGA TGTATATACA
TTGGCAAAAA CCTTAAAGAC TCGTATGAAC TTTGAGATGG CTGTGACCGA AGAGATGCTT
AATATTGCCT GTGAGATTAA GCCTGCTTAC GTGTGTTTAG TGCCTGAAAA ACGTGAAGAG
TTGACCACCG AAGGTGGCCT TGATGTGGCA GGACAACAAG ATAAGATTGC AGCAGCTGTG
GCGCGTTTGA CTAAAGAAGG CATTAAAGTG TCTCTGTTTA TCGATGCCGA TAGTACTCAA
ATTGATGCCG CCGTTGCCGT TGGAGCACCT GTGATTGAGA TCCATACAGG CTGTTACGCT
GATGCTGAAA CGGATAGTGA ACAAGCTGCT GAGCTTAAAC GTATTACCGA AATGGCGACT
TACGCTCATG GCAAAGGCCT AGTGGTTAAC GCTGGTCACG GCTTGCACTA CCATAACGTA
AAAGCCATTG CGGCTATTCC AGAGCTTTAT GAGCTCAATA TCGGCCATGC GATTATAGCT
CGCGCGGCTA TCGATGGATT AGCGACTGCG GTACGTGATA TGAAGCAGTT GATGCTAGAA
GGTCGTCGCG GCGAATAA
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| Protein sequence | MSRILLGVNI DHIATLRQAR GTNYPDPVHA AAVAEHAGAE GITIHLREDR RHIIDRDVYT
LAKTLKTRMN FEMAVTEEML NIACEIKPAY VCLVPEKREE LTTEGGLDVA GQQDKIAAAV
ARLTKEGIKV SLFIDADSTQ IDAAVAVGAP VIEIHTGCYA DAETDSEQAA ELKRITEMAT
YAHGKGLVVN AGHGLHYHNV KAIAAIPELY ELNIGHAIIA RAAIDGLATA VRDMKQLMLE
GRRGE
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