Gene Spea_1032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1032 
Symbol 
ID5661431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1255104 
End bp1255709 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID641235578 
Productanti sigma-E protein, RseA 
Protein accessionYP_001500894 
Protein GI157960860 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000142789 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGT TAGGTCAGGA ATGGGTATCT GCTGCTGTCG ATGGTGAAAT TGATGAGCAC 
ACGTTAGCTG AATTAGTCGC TGACGCAGAT TCACATGAAC AGTGGCGTGA TTATCATTTA 
ATTGGTGATG CGATGCGTGG TGAGTTACCA AAGACGATGT CTTTGGATCT TAGCGCAAGC 
ATTATGGCGG CCATTGATGA AGAACCTGCG ATTGTGGCCC CTAAGCCTAC AGCTGCAACG 
ACAGCGTCAA AGAGTGCGTC AGGTGGTAAG GTTATTCCAC TATTCAAGCA GTTCGGCCAG 
TACGCTATTG CTGCGACAGT CGCTATGGTT GCCGTTGTTG GTGTGCAGAA CTACAACCAA 
GATACGTTAA TGGACAACTC TCCATTACCT GTGCTTAATA CGCGTCCATT AATAGGTAGT 
GCTTCACCTG TAAGCCTACA AACCGGCGCG ATACAGCAGA ATCAAAGCTA TACCAATGAT 
CAGGTTGCTG ACCAGCGTCG CCGTATCAAT GCCTATATTC AAGATCATAT GTTGCAACAA 
AGATTGAATA ATGGAGTGAA TATCGACGAC AATAGCGAGG TCGATACTAC ACCTGTTGCT 
CAATAA
 
Protein sequence
MDKLGQEWVS AAVDGEIDEH TLAELVADAD SHEQWRDYHL IGDAMRGELP KTMSLDLSAS 
IMAAIDEEPA IVAPKPTAAT TASKSASGGK VIPLFKQFGQ YAIAATVAMV AVVGVQNYNQ 
DTLMDNSPLP VLNTRPLIGS ASPVSLQTGA IQQNQSYTND QVADQRRRIN AYIQDHMLQQ 
RLNNGVNIDD NSEVDTTPVA Q