| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1011 |
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| Symbol | |
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| ID | 5661410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1229331 |
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| End bp | 1230527 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641235557 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001500873 |
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| Protein GI | 157960839 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAT TAAGCCGAAA TGAAAGGCTG ACAGTTATCT TAAGGCTGCT CAGTAAACAT
AAAACCTTAT CCAATACACA ATTAGCTAAG TTACTTCAAG TAACTCCAAA GACTATCCGT
TGCGACTTAG TATATCTGGA ACAAGAAAAG CAAGTGATAA GGATACACGG AGGCGTAAAA
CGCTCTGAAG ACTTGGATGT CAATGCCTAC AGCTTAGATA GCTTACTTTC TCGGTTAACC
TCCTGTAGAG CAGAGCTTGA TCTCGTAAAT CAAGGCGGTA ATATCTTGAA GAACAAAATT
TTTGTACTTG GCTCCTTTAA CGTGGACATA GTCGCAAAAC TAGAGCGTTT TCCGCAAGTA
GGTGAGACTC TTCACTCTCA GAACTACAAA ATAGGCGCAG GAGGTAAAGG CGCAAATCAA
GCCTATGCTG CAGCAAAAGT TGGCGCAAGA GTGACTTTTA TGACTAAGAT AGGCAAAGAT
CAATTTAGCC ATTTTGCTAA AGCCCACCTA GCAAGTACTG AAATAGACAG CACTATTATA
GTCGAGTCTG ATACAAGCCC AACCGGAAAT GCGCTCATCT ATGTTTGTGA GCAATCAGGT
GAAAATATGA TTGCCGTTTA TTCCGGCGCT AATATTGAGA TCACTCAAGA AGAGATTCAA
CAAGCAGAGC AACATATCAT TAGTTCTAGC TTGTTTTTGA CTCAACTTGA AAATAATATC
GAGGCGATCA AACAAGCAAT GATGACTGCC CATAAACATA AAGTGAAAGT GGTACTCAAT
CCAGCACCTT ACCATGAGAA TACACCTGAC TTATTAGAGT TTGTAGATCT CATCACCCCT
AATGAAACCG AAGCCTCGTT AATGACCGGA ATCGAAGTAA CAGACCTCGA CAGTGCTAAA
CGAGCAGCTG AAAAAATCAA GCTAATGGGG GTCAATACTG TGGTTATCAC TCGCGGCGCT
AAAGGTGCCC TACTTTATGA AAATGGAAAC TTCAAAGAGG TTGAAGCGAT TAAATGTGCT
GTCACCGACA CAACTGGTGC AGGAGATGCA TTTAATGGCG CTCTAGTGGC TCAAATAGCT
AAAGGTGAAA CATTGCTAGA TGCCGCAAGG TATGCCAATG CATATGCCTC TCTCGCCGTA
GAGCGTGAAG GCGCAGCAAA TATGCCGGAC GCAAATCTAA TTGCGGCACG ACTATAA
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| Protein sequence | MNLLSRNERL TVILRLLSKH KTLSNTQLAK LLQVTPKTIR CDLVYLEQEK QVIRIHGGVK
RSEDLDVNAY SLDSLLSRLT SCRAELDLVN QGGNILKNKI FVLGSFNVDI VAKLERFPQV
GETLHSQNYK IGAGGKGANQ AYAAAKVGAR VTFMTKIGKD QFSHFAKAHL ASTEIDSTII
VESDTSPTGN ALIYVCEQSG ENMIAVYSGA NIEITQEEIQ QAEQHIISSS LFLTQLENNI
EAIKQAMMTA HKHKVKVVLN PAPYHENTPD LLEFVDLITP NETEASLMTG IEVTDLDSAK
RAAEKIKLMG VNTVVITRGA KGALLYENGN FKEVEAIKCA VTDTTGAGDA FNGALVAQIA
KGETLLDAAR YANAYASLAV EREGAANMPD ANLIAARL
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