Gene Spea_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1009 
Symbol 
ID5661408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1227003 
End bp1227608 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content49% 
IMG OID641235555 
Producttranscriptional regulator BetI 
Protein accessionYP_001500871 
Protein GI157960837 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID[TIGR03384] transcriptional repressor BetI 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCC CGCCAATGAA AACCGTTCGA CAGCAACAAC TCATCGAAGC CACTCTAGTC 
TCAGTTGAGC GCCACGGTTT ACACAACACC ACCATCAATA CCATTAGCGG TTTGGCCGGT 
TTATCATCAG GGCTCATCAG TCACTACTTC GGTGGCAAGC AAGGCCTGAT TGAAGCAACC 
CAAAAATATC TATTAGAACA ACTTAAACAA GCATTACTTA GCCGCACCTC AGGCAAGACA 
ATGCTGCCGC TAGAAAGGCT ACATGCGATA GTGGAGGCCA ATTTTACTGA GTTGCAACGC 
TCAAGGCCTG CCACTAAGAC TTGGTTATGC TTCTGGTCAC AAGCCATGCA TGAGCAAGGG 
CTTGCCAGAC TACAGCACAT CAATAGCCAG CGTTTATATA GCAATCTTTT GTTCTCTTTC 
AAAAAACTTC TTCCTAAAAC CCAAGCCGTT ACCGCTGCCA AGCAAACCGC AGCAATGATC 
GACGGCTTCT GGCTCCGCAG CGCCTTAAGC CCGACCCCTG AGAAAGAGTT CGAGCAGGCC 
CAAATTCTAT CTAAAGCCTT TATCGAGGCG GTGATCATGC AGTACGGAGA AAACCGATGT 
CACTAG
 
Protein sequence
MPRPPMKTVR QQQLIEATLV SVERHGLHNT TINTISGLAG LSSGLISHYF GGKQGLIEAT 
QKYLLEQLKQ ALLSRTSGKT MLPLERLHAI VEANFTELQR SRPATKTWLC FWSQAMHEQG 
LARLQHINSQ RLYSNLLFSF KKLLPKTQAV TAAKQTAAMI DGFWLRSALS PTPEKEFEQA 
QILSKAFIEA VIMQYGENRC H