Gene Spea_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1003 
Symbol 
ID5661402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1220434 
End bp1220889 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content49% 
IMG OID641235549 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001500865 
Protein GI157960831 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.597954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCC GAGTTGGACA ACTACACAAT GAACAGGTGC TGGCACTATT GAAAGAGCAC 
CATGAGGATA TGGCGTCTCA CTCACCACCT GAAAGCGTAC ATGCACTGGA TATATCGGGG 
CTTGAAGCGG GTGATGTTAC TTTCTGGAGC CTATGGCGCG AAGATGATCT GGCGGGCTGC 
GGTGCACTCA AGCGGCTGGA TATAGCTCAT GCTGAAATCA AGTCGATGCG CACATCCACT 
GATTTTTTAC GTCAGGGTGT CGCCCAACAA CTATTGGCGC ATATTATCAG TGAGGCAAGA 
TCACAAGGTT ATCGAAGACT CAGCCTTGAG ACTGGCTCTA TGGCTGCCTT CATTCCAGCC 
CGTAAACTCT ATGAGCAGTT TGGCTTTGAA GAGTGCGAGC CATTTGCCGA TTACAAGCAA 
GATCCCTACA GCGCTTTTAT GACTAAAACG CTTTAA
 
Protein sequence
MQIRVGQLHN EQVLALLKEH HEDMASHSPP ESVHALDISG LEAGDVTFWS LWREDDLAGC 
GALKRLDIAH AEIKSMRTST DFLRQGVAQQ LLAHIISEAR SQGYRRLSLE TGSMAAFIPA 
RKLYEQFGFE ECEPFADYKQ DPYSAFMTKT L