Gene Spea_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0998 
Symbol 
ID5661397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1215721 
End bp1216344 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content48% 
IMG OID641235544 
Producthypothetical protein 
Protein accessionYP_001500860 
Protein GI157960826 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATT GGATCTATTT CTTCGACTTG TGTGGTACCG CGGTATTTGC CCTGTCAGGC 
GCATTAGCTG CTGGCAGGCA CAAGATGGAC CCTTTTGGGG TACTGGTGCT GGCTTCGGTT 
ACCGCTATTG GCGGCGGCAG TATTCGCGAC GCCCTGTTAG GCACCACGCC AGTTTTTTGG 
ATCCAAGACC ACAATTACAT CACGGTAATT TTAGTCACAG TGTTTTTAAC CTTTATTTTT 
GTTCGCAAGC CTAAACGAGT CCCACGCTAT ATCTTACCTG TTGCCGACGC TCTTGGTTTG 
GCATTATTTA CTGTGATTGG CGTAGAAAAA GCACTAAATT TAGAACTCAG TGGCATGACT 
GCCGTAGTGA TGGGGTTAAT CACAGGCGTT GGTGGTGGTA TTATTCGTGA CTTACTCTGC 
CAGCAAGTCC CTATGGTACT GCGCACAGAG ATCTACGCCA CCGCATCAAT AATGGGGGGG 
ATATGTTACA CCATTAGCCT GCATTGGGGA GCGGCCGATA TGTTTGCCTT ATTATTTGCA 
ATGAGTACCG CACTCGTGAT TAGATTAGCC GCTATTCGTT GGCACCTGTC GTTACCCGCT 
TTTGATTTAA AGACACCACA ATAA
 
Protein sequence
MIDWIYFFDL CGTAVFALSG ALAAGRHKMD PFGVLVLASV TAIGGGSIRD ALLGTTPVFW 
IQDHNYITVI LVTVFLTFIF VRKPKRVPRY ILPVADALGL ALFTVIGVEK ALNLELSGMT 
AVVMGLITGV GGGIIRDLLC QQVPMVLRTE IYATASIMGG ICYTISLHWG AADMFALLFA 
MSTALVIRLA AIRWHLSLPA FDLKTPQ