| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0994 |
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| Symbol | |
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| ID | 5661393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1211799 |
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| End bp | 1213211 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235540 |
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| Product | peptidase M23B |
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| Protein accession | YP_001500856 |
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| Protein GI | 157960822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases
[COG3061] Cell envelope opacity-associated protein A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000818534 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAGG TTATAACTTT ATTTAAATTA CTGCCAAAAT TACATCAAAT GCTCTTGTGC
GGGTTAGTTT TTGTCACGTT AATTATTATC TTAATACCGT CAGATGACGT GCAAGCATCC
AAACAAACTC CGTCTGCCAG CGGTGAATAT GACGTTAACA CGCGTTATAG CGTACCGTTA
GCTTTTAGAA CTCCCACTGC GCCTGCTGCA TCATTAAGCG AAACGGATCC TGAGCTGCGT
AAACGCCCTG CACAACTTGC ACCAGCATCA AGCAAAACCG CTGAACAGGC TCAACAAGAA
ATAAAGCCTG AGCCGACTGT TGCAGCCCAA AAACTCAACG AAAAACGTTT CCAAGTTAAA
AGTGGCGACA CCTTAGCGGC GCTATTTGAA CGCGCCGGTC TTAGCGCGAA AGATGTTTAT
GATGTGACCC AGCTGCCTAA GGCGAAAAAG AATCTATTAA AAATCATGCC GGGTGATAAC
TTAGTTATCG CCAAGAGTGA AGATGGCAAA CTGGTTCAGC TTAGATACCA TCTCGATAAA
ATCACCACCT TAATCGTCGA TAACGACTCC AGTGGTTATA CAGAGCATAT CGTCACTAAA
AAGGTCGAGG CTCGCAGTAA GTTTGCTAGC GCCACCATAG AAAACAACTT CTGGAACGCC
GGCGTCAATG CCGGGCTTAC CCCAAATCAA ATTATGCAGC TGGCTACCAT TTTCGGCTGG
GATATCGACT TTGCCTTAGA TCTACGTAAA GGCGATCAAT TTGCAATGAT ATTTGAAGAA
GAGTATGCCG ATGGCGAATT CTTAAAGAAC GGCAACATCT TAGCCGCTGA ATTTACCAAT
CAGGGGGACC GCTACACGGC AGTTCGCTAT AAAGATGGTA ACTACTATTC TGAAGAGGGC
CGTAGCATGC GCAAAGCCTT CTTACGCTCT CCGGTCGACT TTAAATATGT CAGCTCAAGC
TTTAACCCTC GTAGACTCCA CCCTGTTACA GGTCAAGTAA GAGCCCATCG TGGGGTTGAC
TATGTAGCAG CCGTAGGTAC CCCAATTAAA GCAGCGGGTA ATGGCCGAGT CATCAAGTCG
AGCTATAACC AATATAATGG TAACTATGTG TTTATTAAGC ACAACGATAC CTATACCACC
AAGTACCTAC ACTTGACTAA ACGCAAAGTA AAGACCGGAC AATCGGTTAA ACAGGGACAG
ATTATCGGTA CCCTAGGCTC AACAGGTCGA GTAACCGGGC CACACCTACA CTATGAATTC
ATCGTCAATG GCGTGCACCG TAATCCTCGC ACTATCAAAC TGCCAAAGTC TGAGCCTATT
GCGAGCAAAG AAAAAGCTCA GTTTGCTAAG CTTAGTGAAA CTATGATGGC TGAGCTTGAA
CATAACAAAC AGGTGCAAAT CGCAGCCCAG TAG
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| Protein sequence | MGKVITLFKL LPKLHQMLLC GLVFVTLIII LIPSDDVQAS KQTPSASGEY DVNTRYSVPL
AFRTPTAPAA SLSETDPELR KRPAQLAPAS SKTAEQAQQE IKPEPTVAAQ KLNEKRFQVK
SGDTLAALFE RAGLSAKDVY DVTQLPKAKK NLLKIMPGDN LVIAKSEDGK LVQLRYHLDK
ITTLIVDNDS SGYTEHIVTK KVEARSKFAS ATIENNFWNA GVNAGLTPNQ IMQLATIFGW
DIDFALDLRK GDQFAMIFEE EYADGEFLKN GNILAAEFTN QGDRYTAVRY KDGNYYSEEG
RSMRKAFLRS PVDFKYVSSS FNPRRLHPVT GQVRAHRGVD YVAAVGTPIK AAGNGRVIKS
SYNQYNGNYV FIKHNDTYTT KYLHLTKRKV KTGQSVKQGQ IIGTLGSTGR VTGPHLHYEF
IVNGVHRNPR TIKLPKSEPI ASKEKAQFAK LSETMMAELE HNKQVQIAAQ
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