| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0992 |
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| Symbol | |
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| ID | 5661391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1208255 |
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| End bp | 1210402 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235538 |
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| Product | winged helix family two component response transcriptional regulator |
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| Protein accession | YP_001500854 |
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| Protein GI | 157960820 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.121669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAGA TAAGAAAGGA AGCGCTATTC AAGCTCGGTC AGTGCGAGGT TAATCCTAGC
GATAATAGCC TTAATTTTTA TGATGCGAAC CCTGATAGTA GCATTCGAAA AGTCTCTATT
CAGCCCAAAT TTATAGAGGT ATTAAGCTAC CTTGCTCGGC AGTATCCGAA GGTTGTCACC
CGTGAAGAGC TAATTGACAA TATCTGGGAA GGCAACAGCT ATGTGGGCAG TAAAGCGCTA
ACTAATGCCA TCTGGCATCT ACGAAAACAA CTCAATCAAG GCGCTGGTGG CGAGCAAGTT
ATCGAGACAG TACGCAAGAT GGGTTACCGC TTATTACTCG AGCCCCAATT TAATGATGCG
GATCTAGTGG ATGAGCCTGA TCTGTTTCAA CTGGCGCAGT TTAAAATTAC CCGGCTGACT
CTGGTTAATC GACGTTTGGC GCTTGCGGCG ACTCTTTGTT TAACCCTTAT GGCGGTAGCC
TGGGCTTACC ATCTTTATCA AGACAGTATT CGGTATGTGC CAACGGTTAA ATTGAACTTA
ACAACGGCAG CTGGCTCAGA GCTTTACCCC GCAATTTCAC CCGATGGCCG CTGGCTGGTT
TATGGCAGCC GTGGTAGCAA TAGGTACGCT AGCCTTTACC TTAAAGATCT GCAAAACCCA
GCCGAAACCC CTAAGCGACT CACTTCGACT AAGTCAGCTG AGATCCGAGC CGTATGGAGT
CCAGATGGTA GCGCCCTGTA TTACGGCTCT GAGTATAGGA GTGAGGATAA GTGCTATCTG
ACTAAACTGA ATTTAGATAG CAATGAAGCA CTTAAGTTGG GAGAGTGCTA CACCTATAGC
TCTGCTATTG ATATCGCGCC AGATGGCAGT CGTTTGGTTT ATATTTGGGA TGCCGACGAA
GGCTTTGGTT CAGGCTTGTA TGAGTTGACT TTAAATCGAG ACGAGCAGCC ACCTAAGCGT
TTATCCTGCA CAGAAGATTG TAGCTACCGC GATCGTGATG CGGCTTTTAG TCCCGATGGA
AGTTGGCTCG CAGTTGCTAG GCGCTTTGGT AATATCTCGG AAGATATCTT TTTGCTACAT
ACCGAAACCG GAGAAGAGCA GCGTTTAACT TTTGGATTAG AGGATATTCG CGGCCTTAGT
TGGCATCAAG ACAGTGAGCG TTTGATCTTT AGCACCGAAA ACTCCGGCGT GAGAAATGGC
TACATAGTGG GCATAGATGA CAAGCAGATC CAGTCGTTGG ACGTGGAGGG CATGAGTTAC
CCACGCTCTA TTCCAGATAG TGATGATGTG GTCTATTCCA ACTATATGCG TGACTATCAG
GTCGCCTCAT TTGCGCTAGA ACAATCCATC CCCACAGCGA CCTTTCCACT GCTACAGGTG
GAATACAGCT ACCGAAACCC TGATTACTCT TCTGTTACTC AGCGTATTGT CTATGTTTCT
AATGAAACCG GCTTTAATGA AATCTGGTCG AGCGATGCCG ATGGTAACCA AAGGCGACAG
CATACCGATC TTAAGCGCAG GGTGGCCTAT CCTAGCTGGT CTCATGATGG CACTAAGGTG
GCTTTCTTGG CTCCAGATGA CAAAAATGAG GGCAACAAAA TTCATGTGCT GGATATGCAG
ACCTCTAATA TCAGTATTCT TGCTACGCCC TATCTAGATC ATAACCGCCC GAGCTGGGGC
TGGAACGATG AGATGGTGTT GGCGAGCAGT AAAGATGGCA TCACTGAGTT TTATCTAGAT
AACCGTTTAC CTAAGGTGAT AAGTCCTATC GATATGCGCC TAGGCAAGAT GATCGCCGAT
GATAAGTTAG TCTTTACTCA GCTTGGAAAA AGCGGACTGT GGATGCTGTC GCTGACCAAG
CCTAGTCAAG TGAGCGAGCT GATCGGTGGC AACCATTTCG GTGAAGGCTA TAACTGGGTG
GCGACAGATA AAGGCATTTA CTTTAGAAAC AGTCGTAGTG GTTTTCAGTT AATTAACTTT
TGGCGTTTTA ACACTGGGCT TATCACCCCA ATCTTAAAGT TACCATCGGG CAGTATTCCT
CGCTCAGGCG CCATGACTTA TGTGGAAAAT CGTAATAGCC TACTGATGAC GCTATCGCAA
AATTACAAAC GCGACGTGAT TAGGTTACAG CATAAGCTAT TGTATTGA
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| Protein sequence | MIEIRKEALF KLGQCEVNPS DNSLNFYDAN PDSSIRKVSI QPKFIEVLSY LARQYPKVVT
REELIDNIWE GNSYVGSKAL TNAIWHLRKQ LNQGAGGEQV IETVRKMGYR LLLEPQFNDA
DLVDEPDLFQ LAQFKITRLT LVNRRLALAA TLCLTLMAVA WAYHLYQDSI RYVPTVKLNL
TTAAGSELYP AISPDGRWLV YGSRGSNRYA SLYLKDLQNP AETPKRLTST KSAEIRAVWS
PDGSALYYGS EYRSEDKCYL TKLNLDSNEA LKLGECYTYS SAIDIAPDGS RLVYIWDADE
GFGSGLYELT LNRDEQPPKR LSCTEDCSYR DRDAAFSPDG SWLAVARRFG NISEDIFLLH
TETGEEQRLT FGLEDIRGLS WHQDSERLIF STENSGVRNG YIVGIDDKQI QSLDVEGMSY
PRSIPDSDDV VYSNYMRDYQ VASFALEQSI PTATFPLLQV EYSYRNPDYS SVTQRIVYVS
NETGFNEIWS SDADGNQRRQ HTDLKRRVAY PSWSHDGTKV AFLAPDDKNE GNKIHVLDMQ
TSNISILATP YLDHNRPSWG WNDEMVLASS KDGITEFYLD NRLPKVISPI DMRLGKMIAD
DKLVFTQLGK SGLWMLSLTK PSQVSELIGG NHFGEGYNWV ATDKGIYFRN SRSGFQLINF
WRFNTGLITP ILKLPSGSIP RSGAMTYVEN RNSLLMTLSQ NYKRDVIRLQ HKLLY
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