| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0983 |
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| Symbol | |
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| ID | 5661382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1196074 |
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| End bp | 1197795 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235529 |
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| Product | chloride channel core |
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| Protein accession | YP_001500845 |
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| Protein GI | 157960811 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.20295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAATTC CTGTGCATCC AGCAATTGTT AAGAAGCGAG AGCAATTTCA AAAGTACTTA
CATACCGACC TTAAAGACAC GCTTTCTCAG TCTAAGGTCA GTGTACAGTT ATGTTTGCTC
GCGTTGCTTT TTGCACTGTT TGCATCCGGT GTCATTGTTC TTTTTAGGTT ATTACTGGTC
TGGTGCGACA CCTTCACCAA AACCCAAGAG CTGAATTTTA CGGACATCAT CGATGACTGG
CGAGTATTAT TACCGCTTTT CGGCTCCTTT TTAATCTGGG GTGTCGCAAA AATGGGATCT
CAGCGCTATA AACGTATGGG CATCGCCTAT GTTATCCACA GAATGAAACT GCATTATGGC
AAGATCCCGC TGCAGTCTGC CCCCGGACAA TTTTTCCAAG CTTTATTTGC CCTTGCCACC
AACTTCTCTG TAGGACGAGA AGGACCGGCC ATCCATTTAG GTGCCGTCAG TGCCAGTGTA
TTAGCGGAAA AGTTTAAGCT TCCCGATAAC AGTGTTCGTG TCATGTGTGC CAGTGGTATT
GCCGCTGGAA TAGCGGCGAT TTTTAACGCG CCACTCGCTG CCGTGATTTT TGTATTTGAA
GTGGTGCTTA GGGAATACAA AATCCACTAC TTCTTCCCGA TCATGCTTTC AGCTATCTGC
GGTGCACTCA GTAGTCAGTT GGTATTTGGT AATGTGCATG AATTCGAGCA GATCGGCGTT
GAAGTGATCC CTCTCAGCCA GTACCCACTG TTAGCTATAT TCGGTTTGGT ACTCGGTTGT
ATTGCAGCAT TTTTTAATAC CAGCCTATTA AAAATTACTG CCATCGGCCA AAAATGGCCG
CTTATTAATC GTCTGTTACT TGCAGGTGCC GTTACTACCC TAGTGGGGCT AGTTTTACCG
CAAGCGATTG GTAGTGGTGA ACTGGCTATT GCAGAGACCA TTAATCAGCA CCCGAGCATT
TTATTCTTAA GCGCGATTTT AGCTGGCAAG ATCATCGCCA CCATCGCCGC TATAGGCTTA
GGCATTCCTG GTGGACTCAT CGGCCCACTC TATGGAATAG GTGCTTTACT CGGCACCATA
TTGGCCTTAA TTAGCGCCTT GTTTTTTCCA AGTATCGCGC CCTATATTGG CTTATATACT
ATTATCGGCA TGACAGGCAT GATGGGCGTG TGTTTAAGCG CCCCACTCGC GGCACTAGTA
GCCTTAATCG AGCTGACAAA TAACGCCTCG ATTATTTTAC CTTCTATGTT TGTGGTGATC
CCTGCCTTCT TAATTGCTCA TCAAGGCTTT AAGACCAAGT CTATATTCTT CAAACAGCTC
GAGATAATGG GGCTGGGCTA TAAAGTTGCG CCAGTAAATC TTGGATTGCA GAAGGTCGGC
GTGCGCCATC TCATGGATAA ACGCTTCGTC ATCGTTTACG ACAACCAAGA ACTATTACTA
GAGGTACTTA AGCGTGCAGA GGGTCGCTCT GTATTGGTAC GCAATGCTCA AGGTGCTGTA
GAGATGTTAC AGCTTGAACT GCAAGTCAGA GATCAAGACA CCACCTTGAC TCGTCATCCG
ATTCAGGGGC TGCCCGATAC ATCTACCCTC AATGAAGTAT ACGCAATTCT TTCTAAGGAA
CGACGAGGGG AGGTTTATAT CTATCAAGAG ACAAATGAAC AGATTGTTGG GGTGATTAAT
TGGGTCTCGC TGCGTAAAGA GATCCGTTCA GGGCAAGTGT AA
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| Protein sequence | MEIPVHPAIV KKREQFQKYL HTDLKDTLSQ SKVSVQLCLL ALLFALFASG VIVLFRLLLV
WCDTFTKTQE LNFTDIIDDW RVLLPLFGSF LIWGVAKMGS QRYKRMGIAY VIHRMKLHYG
KIPLQSAPGQ FFQALFALAT NFSVGREGPA IHLGAVSASV LAEKFKLPDN SVRVMCASGI
AAGIAAIFNA PLAAVIFVFE VVLREYKIHY FFPIMLSAIC GALSSQLVFG NVHEFEQIGV
EVIPLSQYPL LAIFGLVLGC IAAFFNTSLL KITAIGQKWP LINRLLLAGA VTTLVGLVLP
QAIGSGELAI AETINQHPSI LFLSAILAGK IIATIAAIGL GIPGGLIGPL YGIGALLGTI
LALISALFFP SIAPYIGLYT IIGMTGMMGV CLSAPLAALV ALIELTNNAS IILPSMFVVI
PAFLIAHQGF KTKSIFFKQL EIMGLGYKVA PVNLGLQKVG VRHLMDKRFV IVYDNQELLL
EVLKRAEGRS VLVRNAQGAV EMLQLELQVR DQDTTLTRHP IQGLPDTSTL NEVYAILSKE
RRGEVYIYQE TNEQIVGVIN WVSLRKEIRS GQV
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