| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0977 |
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| Symbol | |
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| ID | 5661376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1189129 |
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| End bp | 1191285 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235523 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001500839 |
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| Protein GI | 157960805 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTA AGAACTCCAT CATTGCGCTA TCAATTTCTG CCGCCATCTT TCCAACCTCA
GCCGTCGCAC AAGACAGCGA TATCGAAGTC ATCACAGTCA CCGCGAGTCG AATGGATAAG
CCTGTCAGTG CGATTCCAAA TACGGTGACC ATCATTGACC AAGAGCAGCT AAACGAGCAG
CTTAGAACCA CTCAAGATCT CTCGACCATC ATAGGTAATC TGGCACCGAG TTTTTCCCCT
AGCCGTCAAA AGATGAGTAA TACAGGAGAA ACACTGCGTG GCCGTACACC TTTGATTATG
ATTGATGGTG TACCGCAATC TAACCCACTG CGCAGCGGTG GCCGCTCAGG CCAAACTATA
GATCCGGCCA TGATTGAGCG CATTGAGATC ATCCATGGAG CCAATGCCAT GCATGGCCTC
GGCGCCCAAG GCGGAATTAT CAATTACATC ACTAAAAAGC CCAGTGGCGA TAACGAGCAC
CACGTCAGCT TCGATGTCAC AGTGCCAAAT AGCTTAGACT CTGATGGCAT TAGCTTCGGT
ACCAGTTATA GCTTCTCCGG TGAGTCCGAA AACTTGGATA TGATAGGCGC TGTAAGCTAT
CGCAATAACG GTGTTTATTA CGATGCTAAC GACGAAATGA TCGGTGTCGA TACCACTCAG
GGCGAGTCGA TGGATAGCCA AAGTATGGAT TTTTTCATCA AACTTGGTCA TGACTTTGAC
CAATCTCGCC TTGAACTGAT GGTGAACCAC TACAATATGG AAAATAACGG CGACTACATG
GCCGTTAAAG GCGATAAAGA AAACGACATC CCAACCGGTG CCATCAAGCA AGATCAACCT
TGGGACGCCG CAAACAACCA AGTTACCACC ACCAGCTTGA CTTATACCCA TGAAGATATC
GCCGGTCAGC AACTTAGCCT GCAGTTTTTC AATCAAAATT TCGAAGCCGT CTATGGTGGT
GGTTGTTGGT CAGACTTTTA TGACCCAAGC ATGGAAGGCA GCGATCAAGT TACCGTGTGT
GGCACAGGGG AAAACGGTGA ATCACTTTAC TATGAGCAGT CACGTAACAA GTCTGTCAAA
TGGGGCATGA AAGCCTCTAT GATGGCGAGT AATATTGCCG ACTCAGGCAT GAGTATCGCC
TATGGTTTAG ACATCTTCCG CGACACTACC GAGCAAGATA TGGTGATGAG TGGAGTGTCT
TGGGTTCCAG AGAGTACCTA CGACAATATC GCGCCATTTG CGCAGATTGA TTACGATCTT
ATTGAAAACC TAACCCTTTC TGGTGGCGTG CGTTACGAGT ACGCCAAGCT TAACGTCGAT
GACTACAAGA CCATGTATGG CTACGGCAAT AAGTACGTTG AAGGCGGTAA CCCTGATTTC
AATGAAACCC TGTTTAATAT CGGCGCCTCT TACAAAATAA CCCCAGCGCT ACGGGTTTAT
ACTAGCTTTA GTCAGGGCTT TGGTATGCCT GATGTAGGAC GCGTACTGCG CGACGGTGAC
AACTTTCAAG GACCAAACCC AAGTATTGAA GACACCTTGG CCCTCGACCC CATTGTCACA
GATAACATCG AATTCGGTGC CGATTATCAA GGCGAATACT TCAGTTCAAA AATTGCCTAC
TACCGCTCAT CGAGTGATTA CGGTGCGCGC ATGGTCGATA AAGGCGACGG TAGTGGTTCA
TTTGTCATTA AGCGTGAAAA GAGCCTAATC GAAGGCATAG AAGCCAGTGT TACCGCCTAC
ATTGGTGATA ATGATGATGT TGGCGTTAAC CTTGCGATTC AAAATGGTGA GTACGACTCC
AATGATGACC AGAAGGTGGA TACCGATCTC GACGGCGCCA ATATCTCGCC GAATCGTATT
AACCTGTTCT GGAATCATAA TTTCGACAAC GATATTTCAA CTCGTATTCA GGCTAACTTC
TACATGGATA AAGACTTTAA AGACGAGAAT AATAACGTCT ACGCCAACTT CGATGGCTAC
ACCACGGTTG ACGCGTCAAT TGCTATCCCA GTTTACGACG GCACACTGAG TATCGGCATT
CAAAATCTAT TGAATGAAGA CTATTACACC TACTACTCAC AAACAGTTGG TAAAGATACT
CGCTACTTTA AAGGCATGGG CCGCACCGCG ACGATAGGCT TTAGTCTGCC TTTCTAA
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| Protein sequence | MQFKNSIIAL SISAAIFPTS AVAQDSDIEV ITVTASRMDK PVSAIPNTVT IIDQEQLNEQ
LRTTQDLSTI IGNLAPSFSP SRQKMSNTGE TLRGRTPLIM IDGVPQSNPL RSGGRSGQTI
DPAMIERIEI IHGANAMHGL GAQGGIINYI TKKPSGDNEH HVSFDVTVPN SLDSDGISFG
TSYSFSGESE NLDMIGAVSY RNNGVYYDAN DEMIGVDTTQ GESMDSQSMD FFIKLGHDFD
QSRLELMVNH YNMENNGDYM AVKGDKENDI PTGAIKQDQP WDAANNQVTT TSLTYTHEDI
AGQQLSLQFF NQNFEAVYGG GCWSDFYDPS MEGSDQVTVC GTGENGESLY YEQSRNKSVK
WGMKASMMAS NIADSGMSIA YGLDIFRDTT EQDMVMSGVS WVPESTYDNI APFAQIDYDL
IENLTLSGGV RYEYAKLNVD DYKTMYGYGN KYVEGGNPDF NETLFNIGAS YKITPALRVY
TSFSQGFGMP DVGRVLRDGD NFQGPNPSIE DTLALDPIVT DNIEFGADYQ GEYFSSKIAY
YRSSSDYGAR MVDKGDGSGS FVIKREKSLI EGIEASVTAY IGDNDDVGVN LAIQNGEYDS
NDDQKVDTDL DGANISPNRI NLFWNHNFDN DISTRIQANF YMDKDFKDEN NNVYANFDGY
TTVDASIAIP VYDGTLSIGI QNLLNEDYYT YYSQTVGKDT RYFKGMGRTA TIGFSLPF
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