Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0967 |
Symbol | |
ID | 5661366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1177781 |
End bp | 1178581 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235513 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | YP_001500829 |
Protein GI | 157960795 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000277611 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCT TTCAGGTGAT TATATTGGCT CTGATTCAGG GCCTCACCGA ATTTTTGCCG ATCTCGAGTT CTGCACACCT TATTTTACCT GCTCAGCTTT TAGGTTGGGA AGATCAAGGT CTGTCATTCG ATGTGGCGGT TAATACTGGC TCTTTACTCG CCGTCGTGAT GTATTTCCGA CGAGAGATAT TGTCTATGTT TACTGCATGG ACTGGCAGTG TTGTGAGCCG TAAACAGACT GATGAGAGCA AGCTAGCTTG GTGGATTATC TTAGCCACTA TTCCTGCCGT CATTATTGGC TTTAGCGCTA AAGACTTTAT CGAGACGCAC TTTCGTAGCA TCGAGGTGAT TGCCGCTACG ACCATTATAT TTGGCCTACT GCTTTGGTGG GCTGATAAGA TGCAACGTCA AGGATTGAAT GAGTTCCAAG TGGGCTGGAA AAAAGCATTA GTGATAGGTA TTGCACAGGC GATGGCGCTT ATTCCTGGCA CGTCTCGCTC AGGTGCGACT ATCACTGCAG CGCTGATGCT AGGCTTAAGT CGTGAAGCGG CGGCGCGCTT CTCATTTTTG ATGTCGGTTC CTGTGAGCTT AGGGGCGGCA ATCTTAGTGA CTAAAGATCT TCTTTCTAGC GGCCAAGTTA TTGACTATCA AGCCTTGGGT CTTGGTATTT TAGTGTCGTT TATCGCCGCT TATATCTGTA TCCACTACTT CTTAAAGATC ATCAGCAAGA TGGGCATGAC GCCTTTTGTT ATCTATCGCC TAGCGTTAGG TGCGGTGCTA TGTTGGATAA TCTTCCTGTA A
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Protein sequence | MDTFQVIILA LIQGLTEFLP ISSSAHLILP AQLLGWEDQG LSFDVAVNTG SLLAVVMYFR REILSMFTAW TGSVVSRKQT DESKLAWWII LATIPAVIIG FSAKDFIETH FRSIEVIAAT TIIFGLLLWW ADKMQRQGLN EFQVGWKKAL VIGIAQAMAL IPGTSRSGAT ITAALMLGLS REAAARFSFL MSVPVSLGAA ILVTKDLLSS GQVIDYQALG LGILVSFIAA YICIHYFLKI ISKMGMTPFV IYRLALGAVL CWIIFL
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