| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0957 |
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| Symbol | |
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| ID | 5661356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1166653 |
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| End bp | 1168824 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235502 |
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| Product | gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001500819 |
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| Protein GI | 157960785 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.12457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTTT TCTGGAATAT TTGGGTCGTT GGGTTTATTG CTATCTTTCT AATTTTTATG
GCGTTAGTCA TTGTTAAATA TTGGCGCGAT AACCATAGTG CCGATAAAAA TAAAACCATC
GATACCTTCG ACGGTATTGA TGAGAATGAT GCGCCGCCAC CTCGCTTACT GTTTATCTCC
TATTTAGTCG CTTTTGCCAT TTCTGCAGTT TTTCTCGTGC TTTACCCTGG TCTTGGTAAT
TGGAAAGGCT TAATGGGCTG GCAGCAAAGT GATGATGCCT TAAGCTCACC AGTTACCGAC
TTAACGATGG AAATGGCAAC ACTAAATGAT AAAAGCTTGC TAGCACTTGC GAATAACAAA
ACGGTGACGG CAAGCGGAGC ATCGCTATTT GAAAACCATT GCGCAGCATG CCATAGACGT
AATGCTCAGG GGCAAAAGCA CTTTCCAAAT CTAATTGATA ATGAGTGGCT CTACGGTGGT
ACGCAGAGTG ATATTTTAGA CTCGATAAAG AAAGGCAGAC ACGGGGCAAT GCCCGGTTGG
AAAGGGGTTT TGTCAGAAGA CCAGATCACT AAAATGGCGT ATTACATCGC GTCACTGCAA
CCTAAGCGTC GTAACCTAAA TGCGCCGCAG GTTAAAATCG ATCTAGGTAA AGACATTTTT
GCCGAGTATT GCGCCAGTTG TCATGGTGAT GGCACTGTGG CAAATACTCA AATTGGTGCC
CCTTTACTTA ACGATGCTAT CTGGCTTCAT GGCGGTAGCA TCGAAGAGAT TAAGCACACT
ATAGATTTTG GTTTGAATAA CTTGATGCCT GCATTTGAAG AGCAGCTGAC AGCTGATGAG
ATCTTGGCTA TTGGTGCTTA CATTACTGAA CAACGCCTTG AATACGATGC CAAACTCGCA
GCACTTGATC CTGAGTCAGT AAAGCGTGGT GAATACCTAG TTAATGCAGG CGATTGTGTT
GCCTGCCATA GCTCAGAAGG CGGTGAGCGA TTCGCGGGTG GCTTGCCATT CAAAACACCT
TTTGGCACGG TATATTCAAC CAATATTACC CCCCATGTGA GTGAAGGCAT TGGTAGCGAC
AATTATGCCG ACTTCAAAGC GGCGTTATTT GATGGTAAAG GCCGCCATGG TTATCTCTAC
CCTGCAATGC CTTACACCTC TTATCAATAT TTAAAAGAGC AGGACACCCA AGATCTGTGG
AGCTATTTGC AGTCGATTAC AGCAGTCGCA AGGCAAAACG ATAAGAATGA GATGATCTTC
CCGTCGAATA TCCGTACCGG ATTATTAGCT TGGAATTTGG TGTTTATGGA TACCAATCCA
CTTTCTTATG AGGCGCCCAA GCATGCTCAA CTCACTGAGC AAGAGTTAAA GGAGTGGCAA
CGAGGTAAAT ACTGGGTGAT GGGGCTCGGG CATTGTAGCG AATGTCATAC TCCACGAAAT
TTAGCTCAGG CATTAATACC TGAACAAATA TTCCAAGGTA ACTTGATTGA TGGTTGGAAC
GCCCCAGATA TCAGCGCCAA AGAGCTCTAT CAAGATAGAT GGGATATCGA GTCGTTAACT
GACTTTTTGC ACACAGGGCA CTCGTCTAAA GGCTCTGCAT TTGCTGGTAT GGCAGATGTA
GTGAAAAACA GTACTAGTTT AATGACACGC AAGGATATTA GGACTATCTC TCGTTACCTG
CTAGTGGGGG ATAAGAACAA CACCATTCCA GCTAATACTA AGCAACTTAA CCCAGCAGGC
TTTACCCAAG AGGCGTATGC CGATAAGCAG TTTAATGCTT ATTCATTGTA TGCAGAGACT
TGTGGAGCCT GTCATGGTGA AGATGGTAAA GGTCGTGACC CCATAGCGCC AACCTTATTG
AATAACGGCA TTATCATGCA CAGTGACCCG TTCAATACGA TAGCGGTGAC GATACGTGGA
CTTTCGCCAA CGTATTTAGA TGAAGAGCGT AACTTCATGC CGATGACTAG TTTTCAAAAT
GTATTGACCG ACACTGAGCT GGCTAATCTT ATTAGTTTTG TACGCTACTA TTTAGGCGAT
AGAAAAGAGC CCGTTACCGC AGAGCAAGTT AAGGCTGTGC GTCAACAACT CGAAAAGGCA
GGTTTTGCAG GTAATCTACA CACCACGCCT GATATGTATG ACCACAAAGA TGGTGATATT
GATATCGACT AG
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| Protein sequence | MTVFWNIWVV GFIAIFLIFM ALVIVKYWRD NHSADKNKTI DTFDGIDEND APPPRLLFIS
YLVAFAISAV FLVLYPGLGN WKGLMGWQQS DDALSSPVTD LTMEMATLND KSLLALANNK
TVTASGASLF ENHCAACHRR NAQGQKHFPN LIDNEWLYGG TQSDILDSIK KGRHGAMPGW
KGVLSEDQIT KMAYYIASLQ PKRRNLNAPQ VKIDLGKDIF AEYCASCHGD GTVANTQIGA
PLLNDAIWLH GGSIEEIKHT IDFGLNNLMP AFEEQLTADE ILAIGAYITE QRLEYDAKLA
ALDPESVKRG EYLVNAGDCV ACHSSEGGER FAGGLPFKTP FGTVYSTNIT PHVSEGIGSD
NYADFKAALF DGKGRHGYLY PAMPYTSYQY LKEQDTQDLW SYLQSITAVA RQNDKNEMIF
PSNIRTGLLA WNLVFMDTNP LSYEAPKHAQ LTEQELKEWQ RGKYWVMGLG HCSECHTPRN
LAQALIPEQI FQGNLIDGWN APDISAKELY QDRWDIESLT DFLHTGHSSK GSAFAGMADV
VKNSTSLMTR KDIRTISRYL LVGDKNNTIP ANTKQLNPAG FTQEAYADKQ FNAYSLYAET
CGACHGEDGK GRDPIAPTLL NNGIIMHSDP FNTIAVTIRG LSPTYLDEER NFMPMTSFQN
VLTDTELANL ISFVRYYLGD RKEPVTAEQV KAVRQQLEKA GFAGNLHTTP DMYDHKDGDI
DID
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