| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0955 |
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| Symbol | |
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| ID | 5661354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1164638 |
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| End bp | 1166044 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235500 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001500817 |
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| Protein GI | 157960783 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTAA GCACTGAGCA ATATGACGTA AAGGTTGTTC GTTATTTTAT TGTGGCTGCC
GTTATTTGGT CTATTGCGGG TATGTTTATT GGGGTTGTGC TTGCTGCCCA GCTCTATTGG
CCTGCACTTA ATTTTGATTC TGAATATATC CAATTTGGAC GGTTACGCCC TGTACATACC
TCTGGCGTGA TCTATGGTTT TGTCGTCAAT ATTCTAATGG GAACCTCCCT CTATATTGTG
CAACGAACAG GGCAAACGCG GTTGTTTAAC CGTAGTTTAT CTTGGATGGT GTTTTGGGGC
TGGCAGCTCA TTTTACTGCT TGCGTTGATA ACCTTGCCTC TAGGTTACAC CACGAGTAAA
GAATATGCGG AGCTTGAATG GCCCGTTGAT ATTCTGATTG TGATTGTTTG GGTGCTTTAT
GCCGTATTGT TTTTTGGCAC TATCGCCAAA CGAAAAGTGA AGCATATCTT TGTCGCCAAC
TGGTTCTTTG GCGCTTTTAT TATTGTAATT GCACTAATTT TTATTCTGAA TAATTTAGCC
TTACCAGCCT ATTTCATGAA GTCTTACTCA GTATTTGCAG GCGCTCAAGA TGCCATAGTT
CAGTGGTGGT GGGGGCACAA CGCTGTCGGC TTTTTACTCA CAGCCGGTAT TATCGGCATG
AACTACTACT TCATTCCTAA ACTGGCTGAA CGTCCAATCT ATTCTTACCG ACTGTCTATT
ATCCACTTCT GGGGATTAGT GGGCTTTTAT ACTTGGGCTG GAACTCACCA CCTTCTCTAT
TCGTCAGTGC CAGTTTGGCT ACAAAATATC GGTATCGTGA TGTCGCTGAT ATTGTGGCTA
CCCTCTTGGG CTGGTGCATT TAATAGTGGT ATGACACTAC TGCAAAATAA ACAAAAGCTA
AAGACCGATT ACATTATGTG GTTCTTTATG TCGGCAATTT TGTATTACTG CCTAGCGACA
TTTGAAGGGC CTCTGCTGGC GATACGCTGG TTCAATATGC TTGCCCATAA TACAGAGTGG
GTGGTCGGCC ATGTACATTC CGGTGCACTT GGTTGGGTGG CTATGTCTGG GATTGCCGTT
TTTTATTATT TCATTCCGCG GCTTTGGGGT AAGAGCGGTT TATGGTCTAA CCGCTTACTT
AAAGTGCACT TTTGGTTGGC ACATCTGGGT GTAGCCTTAT ATGCAATTGC ACTTTGGGTC
GCAGGTATTG GAGAAGGCTA CATGTGGCTT ACTCAGCGGG AGAATGGCTC TTTAGCATAC
AGTTTTGTTG AGGCTATGGA CTTTAAAGCG CCGTGGTTAT TTGTGCGTTT CTTTGGTGGG
GCCTGCTTTG TATTGGGTTT ATTGTTGATG GCGTTTAACT TGTATAAGAC GGTATCGATG
ACTGCGGAGG CTAGTGAAGA TGCTTAG
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| Protein sequence | MQVSTEQYDV KVVRYFIVAA VIWSIAGMFI GVVLAAQLYW PALNFDSEYI QFGRLRPVHT
SGVIYGFVVN ILMGTSLYIV QRTGQTRLFN RSLSWMVFWG WQLILLLALI TLPLGYTTSK
EYAELEWPVD ILIVIVWVLY AVLFFGTIAK RKVKHIFVAN WFFGAFIIVI ALIFILNNLA
LPAYFMKSYS VFAGAQDAIV QWWWGHNAVG FLLTAGIIGM NYYFIPKLAE RPIYSYRLSI
IHFWGLVGFY TWAGTHHLLY SSVPVWLQNI GIVMSLILWL PSWAGAFNSG MTLLQNKQKL
KTDYIMWFFM SAILYYCLAT FEGPLLAIRW FNMLAHNTEW VVGHVHSGAL GWVAMSGIAV
FYYFIPRLWG KSGLWSNRLL KVHFWLAHLG VALYAIALWV AGIGEGYMWL TQRENGSLAY
SFVEAMDFKA PWLFVRFFGG ACFVLGLLLM AFNLYKTVSM TAEASEDA
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