| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0953 |
|---|
| Symbol | |
|---|
| ID | 5661352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 1163125 |
|---|
| End bp | 1163556 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641235498 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001500815 |
|---|
| Protein GI | 157960781 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACCC AACAGATCCT TTGTCCGACC GACTTTTCAG AAACAGCATC ACACGCTATA
AGTTATGCCA TTGAGATGGC TAATTTTTAT AACGTTGGGA TCTGTCTATT ACACGTTGTC
GATAAGCCTT TTGGCGATAA ATATACCCGA GTACTCGCGG TGACGCCCGA TGAACTTATC
GAGAGAATGG AAAGAGAGGC CGCAGATAAA ATGCAGCAAT TTATCGACTC GTTTGATATT
TACTTTCCTT TTGAAAGTAA AATTTGTCAT GGCCATCCAG TCGAAAAGAT TTTGGCTACC
GAAAAAAACA TCAATGCTGG AATGATTGTA ATGGCAAGTC ATGGACGAAC AGGACTCGAA
CACTTCTTGA ACGCCAACAC CGCTGAAGAG GTGGCTAACA AAGCTAAGTG CCCAGTTCTT
ATCGTTAAAT AG
|
|---|
| Protein sequence | MRTQQILCPT DFSETASHAI SYAIEMANFY NVGICLLHVV DKPFGDKYTR VLAVTPDELI
ERMEREAADK MQQFIDSFDI YFPFESKICH GHPVEKILAT EKNINAGMIV MASHGRTGLE
HFLNANTAEE VANKAKCPVL IVK
|
|---|
| |