| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0947 |
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| Symbol | |
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| ID | 5661346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1155816 |
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| End bp | 1156952 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235492 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001500809 |
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| Protein GI | 157960775 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAGTA CCTTAGACGT CACCAATAAC TCGATTAAAA AGACGCAGGG CGAAGTGCTA
CTTCAGATAG ACAGAGTCAG TAAGCTATTT GATGAAGTGC GTGCAGTAGA TGATGTCACG
CTCAATATCA AAAAAGGGGA GATTTTTGCT TTGCTAGGTG GGTCAGGATC GGGTAAGTCG
ACTCTGCTCC GTATCCTGGC AGGATTTGAA AAGCCGTCTG AGGGACGTAT TTTTTTAGAT
GGTGAAGATA TCACCGACAT GCCGCCACAT GAACGACCTA TCAATATGAT GTTTCAGTCT
TATGCACTGT TTCCTCATAT GACGGTGGCG CAAAATATTG CCTTCGGTCT GAAGCAAGAT
AAGTTGCCTA AAGCAGAGAT AGAGTCTCGT GTGCAGGAGA TGCTTAAGCT GGTGCACATG
GAAAGTTACG CAAAGCGTAA ACCTAACCAG CTATCAGGCG GTCAACGTCA ACGTGTCGCC
TTAGCCCGCT CGCTGGCGAA ACGTCCTAAG TTATTGTTGC TCGATGAGCC TATGGGAGCG
CTAGATAAAA AGCTACGCAC TCAGATGCAA CTTGAGGTTG TGGATATTCT TGAGGCCGTA
GGCGTGACCT GTGTGATGGT AACTCATGAC CAAGAGGAAG CCATGACCAT GGCGGCGCGG
ATCTCGATTA TGAACGAGGG CTGGATTGCC CAAACAGGCT CTCCTACCGA TATTTATGAG
AGTCCAAATA GCCGTATGGT GGCCGAGTTT ATTGGCAGTG TTAACCTATT TGAAGGTGAG
ATAGTTGTCG ATAAAGCGGA TCATGTACTT ATCGAATGCC AAGGTTTATC GCAAAAACTG
TTTATCGATC ATGGTGTATC AACCAGTGTT GAGGACAAAA CGGTATGGGT CGCAGTTCGC
CCCGAGAAGA CGCGTATTAC CCGTGAGCAA CCCCAAGGAG AGCACAACTG GTCTAGCGGT
GTGGTTGAAG ATATTGCTTA TCTAGGTGGT ATTTCGGTGT ACTACATCCG TCTACCTAAT
AACTTGCTAA TTCAAACTAT CATGACTAAC CGAGAACGTC GCTCCGATCC ACCAACGTGG
GAAGAGGCGG TTTTCATTAG CTGGGAGGCC ACCAGCGGAG TGGTCCTTAG AGCATAA
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| Protein sequence | MASTLDVTNN SIKKTQGEVL LQIDRVSKLF DEVRAVDDVT LNIKKGEIFA LLGGSGSGKS
TLLRILAGFE KPSEGRIFLD GEDITDMPPH ERPINMMFQS YALFPHMTVA QNIAFGLKQD
KLPKAEIESR VQEMLKLVHM ESYAKRKPNQ LSGGQRQRVA LARSLAKRPK LLLLDEPMGA
LDKKLRTQMQ LEVVDILEAV GVTCVMVTHD QEEAMTMAAR ISIMNEGWIA QTGSPTDIYE
SPNSRMVAEF IGSVNLFEGE IVVDKADHVL IECQGLSQKL FIDHGVSTSV EDKTVWVAVR
PEKTRITREQ PQGEHNWSSG VVEDIAYLGG ISVYYIRLPN NLLIQTIMTN RERRSDPPTW
EEAVFISWEA TSGVVLRA
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