Gene Spea_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0941 
Symbol 
ID5661340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1148796 
End bp1149488 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content46% 
IMG OID641235486 
Productaspartate racemase 
Protein accessionYP_001500803 
Protein GI157960769 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TAGGTATGTT AGGCGGCATG AGCTGGGAGT CTACTGCAAG TTACTATAAG 
GCTGTCAATG AAGGAGTAAA GGCAAGGCTC GGTGGTCTGC ACTCTGCAAA AGTGTGTCTC 
TATAGTGTCG ATTTTGAACA AATAGAAAGA CTGCAGCATG CTGGAAAGTG GCAAGAGACG 
GCGGAGATAT TGTCTGATGC GGCTAAAAAT GTTGCAGCTG GCGGCGCTGA TTTTTTACTC 
ATTTGTACGA ATACAATGCA TAAGGTGGCG GATGAGATCC AGGCTCAGCT CTCAATTCCT 
ATTTTACATA TAGCCGATGC AACTGCAGCA AAGCTGGTGG CTAATGGGGT GACTAGAGTG 
GGCCTGTTGG GGACGCGATT CACCATGGAG CAAGATTTCT ATAAAAGTCG GCTGATAAAC 
CAATTCGGTA TAGAAGTGAT AGTTCCAAAT GAAGCGGAGC GCAATCTTGT GCATCAGGTT 
ATTTATGAGG AGTTATGCCA AGGGGTGGTT AACTCCACTT CAAAGCAGCA ATATCTGGAT 
ATCGTTAATG CCTTACATGC ACAAGGAGCC CAAGCGGTCA TTCTGGGGTG TACCGAGATT 
GCATTATTGG TTGGGCAACA AGATACCCAA GTGCCTCTCT ATGATACGAC AGCGATCCAC 
TGTGAATATG CGGTCGAGAT GGCATTAAGT TAA
 
Protein sequence
MKTIGMLGGM SWESTASYYK AVNEGVKARL GGLHSAKVCL YSVDFEQIER LQHAGKWQET 
AEILSDAAKN VAAGGADFLL ICTNTMHKVA DEIQAQLSIP ILHIADATAA KLVANGVTRV 
GLLGTRFTME QDFYKSRLIN QFGIEVIVPN EAERNLVHQV IYEELCQGVV NSTSKQQYLD 
IVNALHAQGA QAVILGCTEI ALLVGQQDTQ VPLYDTTAIH CEYAVEMALS